Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cdk5rap1Q8BTW8 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Cdk5rap1Q8BTW8 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.31■■□□□ 1.48
Cdk5rap1Q8BTW8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.3■■□□□ 1.48
Cdk5rap1Q8BTW8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Cdk5rap1Q8BTW8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC24.3■■□□□ 1.48
Cdk5rap1Q8BTW8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Cdk5rap1Q8BTW8 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cdk5rap1Q8BTW8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cdk5rap1Q8BTW8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.29■■□□□ 1.48
Cdk5rap1Q8BTW8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.28■■□□□ 1.48
Cdk5rap1Q8BTW8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cdk5rap1Q8BTW8 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cdk5rap1Q8BTW8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Cdk5rap1Q8BTW8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cdk5rap1Q8BTW8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Cdk5rap1Q8BTW8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cdk5rap1Q8BTW8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Cdk5rap1Q8BTW8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cdk5rap1Q8BTW8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
Cdk5rap1Q8BTW8 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.25■■□□□ 1.47
Cdk5rap1Q8BTW8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cdk5rap1Q8BTW8 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.24■■□□□ 1.47
Cdk5rap1Q8BTW8 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Cdk5rap1Q8BTW8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Cdk5rap1Q8BTW8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cdk5rap1Q8BTW8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Cdk5rap1Q8BTW8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cdk5rap1Q8BTW8 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cdk5rap1Q8BTW8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
Cdk5rap1Q8BTW8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Cdk5rap1Q8BTW8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Cdk5rap1Q8BTW8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.19■■□□□ 1.46
Cdk5rap1Q8BTW8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.17■■□□□ 1.46
Cdk5rap1Q8BTW8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Cdk5rap1Q8BTW8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC24.16■■□□□ 1.46
Cdk5rap1Q8BTW8 Gm24970-201ENSMUST00000175582 82 ntBASIC24.15■■□□□ 1.46
Cdk5rap1Q8BTW8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.14■■□□□ 1.45
Cdk5rap1Q8BTW8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Cdk5rap1Q8BTW8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Cdk5rap1Q8BTW8 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC24.12■■□□□ 1.45
Cdk5rap1Q8BTW8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
Cdk5rap1Q8BTW8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.12■■□□□ 1.45
Cdk5rap1Q8BTW8 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Cdk5rap1Q8BTW8 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Cdk5rap1Q8BTW8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.11■■□□□ 1.45
Cdk5rap1Q8BTW8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
Cdk5rap1Q8BTW8 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Cdk5rap1Q8BTW8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Cdk5rap1Q8BTW8 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Cdk5rap1Q8BTW8 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Cdk5rap1Q8BTW8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Cdk5rap1Q8BTW8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
Cdk5rap1Q8BTW8 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cdk5rap1Q8BTW8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Cdk5rap1Q8BTW8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Cdk5rap1Q8BTW8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Cdk5rap1Q8BTW8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Cdk5rap1Q8BTW8 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Cdk5rap1Q8BTW8 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Cdk5rap1Q8BTW8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.01■■□□□ 1.43
Cdk5rap1Q8BTW8 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.01■■□□□ 1.43
Cdk5rap1Q8BTW8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Cdk5rap1Q8BTW8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Cdk5rap1Q8BTW8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24■■□□□ 1.43
Cdk5rap1Q8BTW8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Cdk5rap1Q8BTW8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Cdk5rap1Q8BTW8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Cdk5rap1Q8BTW8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Cdk5rap1Q8BTW8 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.98■■□□□ 1.43
Cdk5rap1Q8BTW8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.98■■□□□ 1.43
Cdk5rap1Q8BTW8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cdk5rap1Q8BTW8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cdk5rap1Q8BTW8 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Cdk5rap1Q8BTW8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Cdk5rap1Q8BTW8 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Cdk5rap1Q8BTW8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Cdk5rap1Q8BTW8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Cdk5rap1Q8BTW8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC23.92■■□□□ 1.42
Cdk5rap1Q8BTW8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Cdk5rap1Q8BTW8 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
Cdk5rap1Q8BTW8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.9■■□□□ 1.42
Cdk5rap1Q8BTW8 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Cdk5rap1Q8BTW8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
Cdk5rap1Q8BTW8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cdk5rap1Q8BTW8 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Cdk5rap1Q8BTW8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Cdk5rap1Q8BTW8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Cdk5rap1Q8BTW8 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.85■■□□□ 1.41
Cdk5rap1Q8BTW8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.85■■□□□ 1.41
Cdk5rap1Q8BTW8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Cdk5rap1Q8BTW8 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC23.83■■□□□ 1.41
Cdk5rap1Q8BTW8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Cdk5rap1Q8BTW8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Cdk5rap1Q8BTW8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cdk5rap1Q8BTW8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cdk5rap1Q8BTW8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Cdk5rap1Q8BTW8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.79■■□□□ 1.4
Cdk5rap1Q8BTW8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cdk5rap1Q8BTW8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms