Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Cpsf7Q8BTV2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
Cpsf7Q8BTV2 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Cpsf7Q8BTV2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Cpsf7Q8BTV2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Cpsf7Q8BTV2 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Cpsf7Q8BTV2 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.35■■□□□ 1.65
Cpsf7Q8BTV2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Cpsf7Q8BTV2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Cpsf7Q8BTV2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
Cpsf7Q8BTV2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Cpsf7Q8BTV2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.33■■□□□ 1.65
Cpsf7Q8BTV2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Cpsf7Q8BTV2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Cpsf7Q8BTV2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.32■■□□□ 1.64
Cpsf7Q8BTV2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cpsf7Q8BTV2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cpsf7Q8BTV2 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC25.31■■□□□ 1.64
Cpsf7Q8BTV2 Gm8109-201ENSMUST00000194076 746 ntBASIC25.29■■□□□ 1.64
Cpsf7Q8BTV2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC25.29■■□□□ 1.64
Cpsf7Q8BTV2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Cpsf7Q8BTV2 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Cpsf7Q8BTV2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Cpsf7Q8BTV2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Cpsf7Q8BTV2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
Cpsf7Q8BTV2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Cpsf7Q8BTV2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Cpsf7Q8BTV2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.24■■□□□ 1.63
Cpsf7Q8BTV2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Cpsf7Q8BTV2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Cpsf7Q8BTV2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Cpsf7Q8BTV2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Cpsf7Q8BTV2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.2■■□□□ 1.62
Cpsf7Q8BTV2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Cpsf7Q8BTV2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Cpsf7Q8BTV2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Cpsf7Q8BTV2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.17■■□□□ 1.62
Cpsf7Q8BTV2 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
Cpsf7Q8BTV2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Cpsf7Q8BTV2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Cpsf7Q8BTV2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Cpsf7Q8BTV2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Cpsf7Q8BTV2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Cpsf7Q8BTV2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Cpsf7Q8BTV2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Cpsf7Q8BTV2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.13■■□□□ 1.61
Cpsf7Q8BTV2 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
Cpsf7Q8BTV2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cpsf7Q8BTV2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
Cpsf7Q8BTV2 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
Cpsf7Q8BTV2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
Cpsf7Q8BTV2 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Cpsf7Q8BTV2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Cpsf7Q8BTV2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
Cpsf7Q8BTV2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Cpsf7Q8BTV2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Cpsf7Q8BTV2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Cpsf7Q8BTV2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Cpsf7Q8BTV2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25.05■■□□□ 1.6
Cpsf7Q8BTV2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25.05■■□□□ 1.6
Cpsf7Q8BTV2 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC25.05■■□□□ 1.6
Cpsf7Q8BTV2 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Cpsf7Q8BTV2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Cpsf7Q8BTV2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25.04■■□□□ 1.6
Cpsf7Q8BTV2 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.04■■□□□ 1.6
Cpsf7Q8BTV2 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Cpsf7Q8BTV2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Cpsf7Q8BTV2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.03■■□□□ 1.6
Cpsf7Q8BTV2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC25.03■■□□□ 1.6
Cpsf7Q8BTV2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cpsf7Q8BTV2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Cpsf7Q8BTV2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC25.02■■□□□ 1.6
Cpsf7Q8BTV2 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Cpsf7Q8BTV2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
Cpsf7Q8BTV2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC25■■□□□ 1.59
Cpsf7Q8BTV2 Gm30346-201ENSMUST00000218641 1699 ntBASIC25■■□□□ 1.59
Cpsf7Q8BTV2 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Cpsf7Q8BTV2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Cpsf7Q8BTV2 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC24.98■■□□□ 1.59
Cpsf7Q8BTV2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Cpsf7Q8BTV2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Cpsf7Q8BTV2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Cpsf7Q8BTV2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Cpsf7Q8BTV2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.59
Cpsf7Q8BTV2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
Cpsf7Q8BTV2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Cpsf7Q8BTV2 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
Cpsf7Q8BTV2 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Cpsf7Q8BTV2 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Cpsf7Q8BTV2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
Cpsf7Q8BTV2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Cpsf7Q8BTV2 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Cpsf7Q8BTV2 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Cpsf7Q8BTV2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Cpsf7Q8BTV2 Gm27322-201ENSMUST00000184007 104 ntBASIC24.91■■□□□ 1.58
Cpsf7Q8BTV2 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Cpsf7Q8BTV2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Cpsf7Q8BTV2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Cpsf7Q8BTV2 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.88■■□□□ 1.57
Cpsf7Q8BTV2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms