Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Zfp131-205ENSMUST00000223812 663 ntBASIC24.33■■□□□ 1.49
Cpsf4Q8BQZ5 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cpsf4Q8BQZ5 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cpsf4Q8BQZ5 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cpsf4Q8BQZ5 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cpsf4Q8BQZ5 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cpsf4Q8BQZ5 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cpsf4Q8BQZ5 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Cpsf4Q8BQZ5 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Cpsf4Q8BQZ5 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Cpsf4Q8BQZ5 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Cpsf4Q8BQZ5 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cpsf4Q8BQZ5 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cpsf4Q8BQZ5 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cpsf4Q8BQZ5 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Cpsf4Q8BQZ5 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Cpsf4Q8BQZ5 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Cpsf4Q8BQZ5 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cpsf4Q8BQZ5 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.22■■□□□ 1.47
Cpsf4Q8BQZ5 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Cpsf4Q8BQZ5 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.19■■□□□ 1.46
Cpsf4Q8BQZ5 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cpsf4Q8BQZ5 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cpsf4Q8BQZ5 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC24.18■■□□□ 1.46
Cpsf4Q8BQZ5 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.18■■□□□ 1.46
Cpsf4Q8BQZ5 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Cpsf4Q8BQZ5 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.17■■□□□ 1.46
Cpsf4Q8BQZ5 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Cpsf4Q8BQZ5 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cpsf4Q8BQZ5 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
Cpsf4Q8BQZ5 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC24.14■■□□□ 1.45
Cpsf4Q8BQZ5 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Cpsf4Q8BQZ5 Zxda-201ENSMUST00000117281 2621 ntBASIC24.14■■□□□ 1.45
Cpsf4Q8BQZ5 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.13■■□□□ 1.45
Cpsf4Q8BQZ5 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Cpsf4Q8BQZ5 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Cpsf4Q8BQZ5 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.12■■□□□ 1.45
Cpsf4Q8BQZ5 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
Cpsf4Q8BQZ5 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Cpsf4Q8BQZ5 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Cpsf4Q8BQZ5 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Cpsf4Q8BQZ5 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
Cpsf4Q8BQZ5 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cpsf4Q8BQZ5 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cpsf4Q8BQZ5 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Cpsf4Q8BQZ5 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Cpsf4Q8BQZ5 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.05■■□□□ 1.44
Cpsf4Q8BQZ5 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
Cpsf4Q8BQZ5 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Cpsf4Q8BQZ5 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC24.04■■□□□ 1.44
Cpsf4Q8BQZ5 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC24.03■■□□□ 1.44
Cpsf4Q8BQZ5 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.01■■□□□ 1.43
Cpsf4Q8BQZ5 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Cpsf4Q8BQZ5 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
Cpsf4Q8BQZ5 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
Cpsf4Q8BQZ5 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
Cpsf4Q8BQZ5 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Cpsf4Q8BQZ5 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24■■□□□ 1.43
Cpsf4Q8BQZ5 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.99■■□□□ 1.43
Cpsf4Q8BQZ5 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.99■■□□□ 1.43
Cpsf4Q8BQZ5 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Cpsf4Q8BQZ5 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.97■■□□□ 1.43
Cpsf4Q8BQZ5 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cpsf4Q8BQZ5 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cpsf4Q8BQZ5 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cpsf4Q8BQZ5 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.94■■□□□ 1.42
Cpsf4Q8BQZ5 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cpsf4Q8BQZ5 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.94■■□□□ 1.42
Cpsf4Q8BQZ5 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cpsf4Q8BQZ5 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cpsf4Q8BQZ5 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Cpsf4Q8BQZ5 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.93■■□□□ 1.42
Cpsf4Q8BQZ5 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
Cpsf4Q8BQZ5 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Cpsf4Q8BQZ5 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Cpsf4Q8BQZ5 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Cpsf4Q8BQZ5 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Cpsf4Q8BQZ5 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Cpsf4Q8BQZ5 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Cpsf4Q8BQZ5 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cpsf4Q8BQZ5 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
Cpsf4Q8BQZ5 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cpsf4Q8BQZ5 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Cpsf4Q8BQZ5 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.87■■□□□ 1.41
Cpsf4Q8BQZ5 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Cpsf4Q8BQZ5 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Cpsf4Q8BQZ5 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.86■■□□□ 1.41
Cpsf4Q8BQZ5 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Cpsf4Q8BQZ5 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Cpsf4Q8BQZ5 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Cpsf4Q8BQZ5 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Cpsf4Q8BQZ5 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Cpsf4Q8BQZ5 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Cpsf4Q8BQZ5 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Cpsf4Q8BQZ5 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Cpsf4Q8BQZ5 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.81■■□□□ 1.4
Cpsf4Q8BQZ5 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Cpsf4Q8BQZ5 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cpsf4Q8BQZ5 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cpsf4Q8BQZ5 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms