Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Prpf18Q8BM39 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Prpf18Q8BM39 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.74■■□□□ 1.39
Prpf18Q8BM39 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Prpf18Q8BM39 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Prpf18Q8BM39 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Prpf18Q8BM39 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.7■■□□□ 1.39
Prpf18Q8BM39 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Prpf18Q8BM39 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Prpf18Q8BM39 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Prpf18Q8BM39 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Prpf18Q8BM39 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Prpf18Q8BM39 Gm17082-201ENSMUST00000166043 1091 ntBASIC23.66■■□□□ 1.38
Prpf18Q8BM39 Gm27322-201ENSMUST00000184007 104 ntBASIC23.66■■□□□ 1.38
Prpf18Q8BM39 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.65■■□□□ 1.38
Prpf18Q8BM39 Amer2-203ENSMUST00000225247 2662 ntBASIC23.65■■□□□ 1.38
Prpf18Q8BM39 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
Prpf18Q8BM39 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Prpf18Q8BM39 Gm26115-201ENSMUST00000175605 87 ntBASIC23.64■■□□□ 1.37
Prpf18Q8BM39 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
Prpf18Q8BM39 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.63■■□□□ 1.37
Prpf18Q8BM39 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Prpf18Q8BM39 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Prpf18Q8BM39 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.6■■□□□ 1.37
Prpf18Q8BM39 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Prpf18Q8BM39 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.36
Prpf18Q8BM39 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.57■■□□□ 1.36
Prpf18Q8BM39 Gm8109-201ENSMUST00000194076 746 ntBASIC23.57■■□□□ 1.36
Prpf18Q8BM39 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.57■■□□□ 1.36
Prpf18Q8BM39 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Prpf18Q8BM39 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Prpf18Q8BM39 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Prpf18Q8BM39 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Prpf18Q8BM39 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Prpf18Q8BM39 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Prpf18Q8BM39 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Prpf18Q8BM39 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.54■■□□□ 1.36
Prpf18Q8BM39 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.53■■□□□ 1.36
Prpf18Q8BM39 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Prpf18Q8BM39 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Prpf18Q8BM39 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Prpf18Q8BM39 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Prpf18Q8BM39 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.49■■□□□ 1.35
Prpf18Q8BM39 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
Prpf18Q8BM39 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Prpf18Q8BM39 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
Prpf18Q8BM39 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Prpf18Q8BM39 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
Prpf18Q8BM39 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.35
Prpf18Q8BM39 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Prpf18Q8BM39 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Prpf18Q8BM39 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Prpf18Q8BM39 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Prpf18Q8BM39 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Prpf18Q8BM39 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.39■■□□□ 1.34
Prpf18Q8BM39 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Prpf18Q8BM39 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Prpf18Q8BM39 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
Prpf18Q8BM39 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.37■■□□□ 1.33
Prpf18Q8BM39 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Prpf18Q8BM39 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Prpf18Q8BM39 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Prpf18Q8BM39 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
Prpf18Q8BM39 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Prpf18Q8BM39 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Prpf18Q8BM39 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Prpf18Q8BM39 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Prpf18Q8BM39 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Prpf18Q8BM39 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
Prpf18Q8BM39 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Prpf18Q8BM39 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.32■■□□□ 1.32
Prpf18Q8BM39 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Prpf18Q8BM39 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Prpf18Q8BM39 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.31■■□□□ 1.32
Prpf18Q8BM39 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Prpf18Q8BM39 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Prpf18Q8BM39 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
Prpf18Q8BM39 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Prpf18Q8BM39 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Prpf18Q8BM39 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Prpf18Q8BM39 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Prpf18Q8BM39 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Prpf18Q8BM39 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Prpf18Q8BM39 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Prpf18Q8BM39 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Prpf18Q8BM39 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Prpf18Q8BM39 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Prpf18Q8BM39 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Prpf18Q8BM39 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Prpf18Q8BM39 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Prpf18Q8BM39 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Prpf18Q8BM39 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Prpf18Q8BM39 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Prpf18Q8BM39 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Prpf18Q8BM39 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Prpf18Q8BM39 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Prpf18Q8BM39 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.21■■□□□ 1.31
Prpf18Q8BM39 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Prpf18Q8BM39 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Prpf18Q8BM39 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms