Protein–RNA interactions for Protein: Q8BJA3

Hmbox1, Homeobox-containing protein 1, mousemouse

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmbox1Q8BJA3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Hmbox1Q8BJA3 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Hmbox1Q8BJA3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Hmbox1Q8BJA3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
Hmbox1Q8BJA3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Hmbox1Q8BJA3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Hmbox1Q8BJA3 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Hmbox1Q8BJA3 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.63■■□□□ 1.53
Hmbox1Q8BJA3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Hmbox1Q8BJA3 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Hmbox1Q8BJA3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24.59■■□□□ 1.53
Hmbox1Q8BJA3 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Hmbox1Q8BJA3 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.57■■□□□ 1.52
Hmbox1Q8BJA3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24.57■■□□□ 1.52
Hmbox1Q8BJA3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.56■■□□□ 1.52
Hmbox1Q8BJA3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Hmbox1Q8BJA3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC24.55■■□□□ 1.52
Hmbox1Q8BJA3 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Hmbox1Q8BJA3 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Hmbox1Q8BJA3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Hmbox1Q8BJA3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Hmbox1Q8BJA3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.52■■□□□ 1.52
Hmbox1Q8BJA3 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
Hmbox1Q8BJA3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.5■■□□□ 1.51
Hmbox1Q8BJA3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC24.5■■□□□ 1.51
Hmbox1Q8BJA3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Hmbox1Q8BJA3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Hmbox1Q8BJA3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Hmbox1Q8BJA3 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.48■■□□□ 1.51
Hmbox1Q8BJA3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Hmbox1Q8BJA3 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Hmbox1Q8BJA3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Hmbox1Q8BJA3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Hmbox1Q8BJA3 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Hmbox1Q8BJA3 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Hmbox1Q8BJA3 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Hmbox1Q8BJA3 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Hmbox1Q8BJA3 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Hmbox1Q8BJA3 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Hmbox1Q8BJA3 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Hmbox1Q8BJA3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Hmbox1Q8BJA3 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.38■■□□□ 1.49
Hmbox1Q8BJA3 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Hmbox1Q8BJA3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC24.37■■□□□ 1.49
Hmbox1Q8BJA3 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.37■■□□□ 1.49
Hmbox1Q8BJA3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Hmbox1Q8BJA3 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
Hmbox1Q8BJA3 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Hmbox1Q8BJA3 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.35■■□□□ 1.49
Hmbox1Q8BJA3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.34■■□□□ 1.49
Hmbox1Q8BJA3 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Hmbox1Q8BJA3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Hmbox1Q8BJA3 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Hmbox1Q8BJA3 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.3■■□□□ 1.48
Hmbox1Q8BJA3 Gm8503-201ENSMUST00000118131 455 ntBASIC24.3■■□□□ 1.48
Hmbox1Q8BJA3 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.3■■□□□ 1.48
Hmbox1Q8BJA3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Hmbox1Q8BJA3 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Hmbox1Q8BJA3 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
Hmbox1Q8BJA3 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Hmbox1Q8BJA3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
Hmbox1Q8BJA3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Hmbox1Q8BJA3 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Hmbox1Q8BJA3 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
Hmbox1Q8BJA3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
Hmbox1Q8BJA3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Hmbox1Q8BJA3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Hmbox1Q8BJA3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.22■■□□□ 1.47
Hmbox1Q8BJA3 Mipep-204ENSMUST00000225043 1548 ntBASIC24.21■■□□□ 1.47
Hmbox1Q8BJA3 Gm24970-201ENSMUST00000175582 82 ntBASIC24.21■■□□□ 1.47
Hmbox1Q8BJA3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Hmbox1Q8BJA3 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Hmbox1Q8BJA3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Hmbox1Q8BJA3 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Hmbox1Q8BJA3 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Hmbox1Q8BJA3 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.18■■□□□ 1.46
Hmbox1Q8BJA3 Gm6821-201ENSMUST00000107540 542 ntBASIC24.18■■□□□ 1.46
Hmbox1Q8BJA3 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.18■■□□□ 1.46
Hmbox1Q8BJA3 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Hmbox1Q8BJA3 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.17■■□□□ 1.46
Hmbox1Q8BJA3 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Hmbox1Q8BJA3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Hmbox1Q8BJA3 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.46
Hmbox1Q8BJA3 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Hmbox1Q8BJA3 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.13■■□□□ 1.45
Hmbox1Q8BJA3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Hmbox1Q8BJA3 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Hmbox1Q8BJA3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Hmbox1Q8BJA3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Hmbox1Q8BJA3 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Hmbox1Q8BJA3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Hmbox1Q8BJA3 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Hmbox1Q8BJA3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
Hmbox1Q8BJA3 Zxda-201ENSMUST00000117281 2621 ntBASIC24.06■■□□□ 1.44
Hmbox1Q8BJA3 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Hmbox1Q8BJA3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Hmbox1Q8BJA3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Hmbox1Q8BJA3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC24.04■■□□□ 1.44
Hmbox1Q8BJA3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Hmbox1Q8BJA3 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms