Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Trim23Q8BGX0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Trim23Q8BGX0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Trim23Q8BGX0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Trim23Q8BGX0 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Trim23Q8BGX0 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Trim23Q8BGX0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
Trim23Q8BGX0 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Trim23Q8BGX0 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Trim23Q8BGX0 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Trim23Q8BGX0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC24.67■■□□□ 1.54
Trim23Q8BGX0 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Trim23Q8BGX0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Trim23Q8BGX0 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
Trim23Q8BGX0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
Trim23Q8BGX0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.62■■□□□ 1.53
Trim23Q8BGX0 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
Trim23Q8BGX0 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.6■■□□□ 1.53
Trim23Q8BGX0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trim23Q8BGX0 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Trim23Q8BGX0 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Trim23Q8BGX0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Trim23Q8BGX0 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Trim23Q8BGX0 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.53■■□□□ 1.52
Trim23Q8BGX0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Trim23Q8BGX0 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Trim23Q8BGX0 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Trim23Q8BGX0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.51■■□□□ 1.51
Trim23Q8BGX0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trim23Q8BGX0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trim23Q8BGX0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Trim23Q8BGX0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Trim23Q8BGX0 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Trim23Q8BGX0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Trim23Q8BGX0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Trim23Q8BGX0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trim23Q8BGX0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Trim23Q8BGX0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.43■■□□□ 1.5
Trim23Q8BGX0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.42■■□□□ 1.5
Trim23Q8BGX0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.42■■□□□ 1.5
Trim23Q8BGX0 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Trim23Q8BGX0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Trim23Q8BGX0 Gm9397-201ENSMUST00000200125 605 ntBASIC24.41■■□□□ 1.5
Trim23Q8BGX0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.41■■□□□ 1.5
Trim23Q8BGX0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Trim23Q8BGX0 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Trim23Q8BGX0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Trim23Q8BGX0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Trim23Q8BGX0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC24.39■■□□□ 1.49
Trim23Q8BGX0 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Trim23Q8BGX0 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Trim23Q8BGX0 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Trim23Q8BGX0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Trim23Q8BGX0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.36■■□□□ 1.49
Trim23Q8BGX0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.35■■□□□ 1.49
Trim23Q8BGX0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24.35■■□□□ 1.49
Trim23Q8BGX0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Trim23Q8BGX0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.32■■□□□ 1.48
Trim23Q8BGX0 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Trim23Q8BGX0 Gm45855-201ENSMUST00000212546 880 ntBASIC24.31■■□□□ 1.48
Trim23Q8BGX0 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Trim23Q8BGX0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.3■■□□□ 1.48
Trim23Q8BGX0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Trim23Q8BGX0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
Trim23Q8BGX0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Trim23Q8BGX0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Trim23Q8BGX0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.28■■□□□ 1.48
Trim23Q8BGX0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Trim23Q8BGX0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trim23Q8BGX0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Trim23Q8BGX0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.27■■□□□ 1.48
Trim23Q8BGX0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trim23Q8BGX0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Trim23Q8BGX0 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Trim23Q8BGX0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Trim23Q8BGX0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Trim23Q8BGX0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Trim23Q8BGX0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
Trim23Q8BGX0 Gm24970-201ENSMUST00000175582 82 ntBASIC24.24■■□□□ 1.47
Trim23Q8BGX0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.24■■□□□ 1.47
Trim23Q8BGX0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC24.24■■□□□ 1.47
Trim23Q8BGX0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Trim23Q8BGX0 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.24■■□□□ 1.47
Trim23Q8BGX0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Trim23Q8BGX0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Trim23Q8BGX0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Trim23Q8BGX0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.22■■□□□ 1.47
Trim23Q8BGX0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.22■■□□□ 1.47
Trim23Q8BGX0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Trim23Q8BGX0 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Trim23Q8BGX0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Trim23Q8BGX0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.18■■□□□ 1.46
Trim23Q8BGX0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Trim23Q8BGX0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
Trim23Q8BGX0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Trim23Q8BGX0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Trim23Q8BGX0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Trim23Q8BGX0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Trim23Q8BGX0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Trim23Q8BGX0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms