Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Trim23Q8BGX0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Trim23Q8BGX0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Trim23Q8BGX0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Trim23Q8BGX0 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Trim23Q8BGX0 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Trim23Q8BGX0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
Trim23Q8BGX0 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Trim23Q8BGX0 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Trim23Q8BGX0 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Trim23Q8BGX0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC24.67■■□□□ 1.54
Trim23Q8BGX0 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Trim23Q8BGX0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Trim23Q8BGX0 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
Trim23Q8BGX0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
Trim23Q8BGX0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.62■■□□□ 1.53
Trim23Q8BGX0 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
Trim23Q8BGX0 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.6■■□□□ 1.53
Trim23Q8BGX0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trim23Q8BGX0 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Trim23Q8BGX0 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Trim23Q8BGX0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Trim23Q8BGX0 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Trim23Q8BGX0 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.53■■□□□ 1.52
Trim23Q8BGX0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Trim23Q8BGX0 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Trim23Q8BGX0 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Trim23Q8BGX0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.51■■□□□ 1.51
Trim23Q8BGX0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trim23Q8BGX0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trim23Q8BGX0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Trim23Q8BGX0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Trim23Q8BGX0 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Trim23Q8BGX0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Trim23Q8BGX0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Trim23Q8BGX0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trim23Q8BGX0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Trim23Q8BGX0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.43■■□□□ 1.5
Trim23Q8BGX0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.42■■□□□ 1.5
Trim23Q8BGX0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.42■■□□□ 1.5
Trim23Q8BGX0 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Trim23Q8BGX0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Trim23Q8BGX0 Gm9397-201ENSMUST00000200125 605 ntBASIC24.41■■□□□ 1.5
Trim23Q8BGX0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.41■■□□□ 1.5
Trim23Q8BGX0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Trim23Q8BGX0 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Trim23Q8BGX0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Trim23Q8BGX0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Trim23Q8BGX0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC24.39■■□□□ 1.49
Trim23Q8BGX0 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Trim23Q8BGX0 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Trim23Q8BGX0 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Trim23Q8BGX0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Trim23Q8BGX0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.36■■□□□ 1.49
Trim23Q8BGX0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.35■■□□□ 1.49
Trim23Q8BGX0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24.35■■□□□ 1.49
Trim23Q8BGX0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Trim23Q8BGX0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.32■■□□□ 1.48
Trim23Q8BGX0 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Trim23Q8BGX0 Gm45855-201ENSMUST00000212546 880 ntBASIC24.31■■□□□ 1.48
Trim23Q8BGX0 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Trim23Q8BGX0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.3■■□□□ 1.48
Trim23Q8BGX0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Trim23Q8BGX0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
Trim23Q8BGX0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Trim23Q8BGX0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Trim23Q8BGX0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.28■■□□□ 1.48
Trim23Q8BGX0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Trim23Q8BGX0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trim23Q8BGX0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Trim23Q8BGX0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.27■■□□□ 1.48
Trim23Q8BGX0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trim23Q8BGX0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Trim23Q8BGX0 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Trim23Q8BGX0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Trim23Q8BGX0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Trim23Q8BGX0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Trim23Q8BGX0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
Trim23Q8BGX0 Gm24970-201ENSMUST00000175582 82 ntBASIC24.24■■□□□ 1.47
Trim23Q8BGX0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.24■■□□□ 1.47
Trim23Q8BGX0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC24.24■■□□□ 1.47
Trim23Q8BGX0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Trim23Q8BGX0 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.24■■□□□ 1.47
Trim23Q8BGX0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Trim23Q8BGX0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Trim23Q8BGX0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Trim23Q8BGX0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.22■■□□□ 1.47
Trim23Q8BGX0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.22■■□□□ 1.47
Trim23Q8BGX0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Trim23Q8BGX0 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Trim23Q8BGX0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Trim23Q8BGX0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.18■■□□□ 1.46
Trim23Q8BGX0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Trim23Q8BGX0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
Trim23Q8BGX0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Trim23Q8BGX0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Trim23Q8BGX0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Trim23Q8BGX0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Trim23Q8BGX0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Trim23Q8BGX0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms