Protein–RNA interactions for Protein: Q80VR2

Ell3, RNA polymerase II elongation factor ELL3, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ell3Q80VR2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.36■□□□□ 0.85
Ell3Q80VR2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ell3Q80VR2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ell3Q80VR2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.34■□□□□ 0.85
Ell3Q80VR2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ell3Q80VR2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.33■□□□□ 0.85
Ell3Q80VR2 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ell3Q80VR2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.32■□□□□ 0.84
Ell3Q80VR2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ell3Q80VR2 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ell3Q80VR2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Ell3Q80VR2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ell3Q80VR2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.29■□□□□ 0.84
Ell3Q80VR2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ell3Q80VR2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ell3Q80VR2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ell3Q80VR2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ell3Q80VR2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ell3Q80VR2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ell3Q80VR2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ell3Q80VR2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ell3Q80VR2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ell3Q80VR2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.23■□□□□ 0.83
Ell3Q80VR2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ell3Q80VR2 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ell3Q80VR2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ell3Q80VR2 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ell3Q80VR2 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ell3Q80VR2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Ell3Q80VR2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ell3Q80VR2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ell3Q80VR2 Rab21-202ENSMUST00000218831 843 ntBASIC20.19■□□□□ 0.82
Ell3Q80VR2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Ell3Q80VR2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Ell3Q80VR2 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ell3Q80VR2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ell3Q80VR2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ell3Q80VR2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.17■□□□□ 0.82
Ell3Q80VR2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ell3Q80VR2 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ell3Q80VR2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ell3Q80VR2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ell3Q80VR2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ell3Q80VR2 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ell3Q80VR2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ell3Q80VR2 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ell3Q80VR2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ell3Q80VR2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ell3Q80VR2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ell3Q80VR2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.11■□□□□ 0.81
Ell3Q80VR2 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ell3Q80VR2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.11■□□□□ 0.81
Ell3Q80VR2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Ell3Q80VR2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ell3Q80VR2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ell3Q80VR2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Ell3Q80VR2 Gm25262-201ENSMUST00000174934 133 ntBASIC20.09■□□□□ 0.81
Ell3Q80VR2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.09■□□□□ 0.81
Ell3Q80VR2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ell3Q80VR2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ell3Q80VR2 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Ell3Q80VR2 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ell3Q80VR2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ell3Q80VR2 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ell3Q80VR2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ell3Q80VR2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ell3Q80VR2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Ell3Q80VR2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Ell3Q80VR2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ell3Q80VR2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Ell3Q80VR2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ell3Q80VR2 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ell3Q80VR2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ell3Q80VR2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20■□□□□ 0.79
Ell3Q80VR2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ell3Q80VR2 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ell3Q80VR2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ell3Q80VR2 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ell3Q80VR2 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ell3Q80VR2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ell3Q80VR2 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ell3Q80VR2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ell3Q80VR2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ell3Q80VR2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Ell3Q80VR2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ell3Q80VR2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ell3Q80VR2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ell3Q80VR2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ell3Q80VR2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ell3Q80VR2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ell3Q80VR2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ell3Q80VR2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.92■□□□□ 0.78
Ell3Q80VR2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ell3Q80VR2 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.9■□□□□ 0.78
Ell3Q80VR2 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Ell3Q80VR2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ell3Q80VR2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.89■□□□□ 0.77
Ell3Q80VR2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ell3Q80VR2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ell3Q80VR2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms