Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Gm8503-201ENSMUST00000118131 455 ntBASIC24.6■■□□□ 1.53
Otop1Q80VM9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Otop1Q80VM9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Otop1Q80VM9 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.59■■□□□ 1.53
Otop1Q80VM9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC24.59■■□□□ 1.53
Otop1Q80VM9 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Otop1Q80VM9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Otop1Q80VM9 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Otop1Q80VM9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
Otop1Q80VM9 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Otop1Q80VM9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
Otop1Q80VM9 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Otop1Q80VM9 Gm6821-201ENSMUST00000107540 542 ntBASIC24.52■■□□□ 1.52
Otop1Q80VM9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Otop1Q80VM9 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Otop1Q80VM9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
Otop1Q80VM9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Otop1Q80VM9 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Otop1Q80VM9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Otop1Q80VM9 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Otop1Q80VM9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Otop1Q80VM9 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Otop1Q80VM9 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.43■■□□□ 1.5
Otop1Q80VM9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Otop1Q80VM9 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Otop1Q80VM9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
Otop1Q80VM9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
Otop1Q80VM9 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Otop1Q80VM9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.4■■□□□ 1.5
Otop1Q80VM9 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Otop1Q80VM9 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Otop1Q80VM9 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Otop1Q80VM9 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Otop1Q80VM9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
Otop1Q80VM9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Otop1Q80VM9 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
Otop1Q80VM9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Otop1Q80VM9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Otop1Q80VM9 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.31■■□□□ 1.48
Otop1Q80VM9 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
Otop1Q80VM9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.3■■□□□ 1.48
Otop1Q80VM9 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC24.25■■□□□ 1.47
Otop1Q80VM9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Otop1Q80VM9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Otop1Q80VM9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Otop1Q80VM9 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.22■■□□□ 1.47
Otop1Q80VM9 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Otop1Q80VM9 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Otop1Q80VM9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.2■■□□□ 1.46
Otop1Q80VM9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Otop1Q80VM9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.19■■□□□ 1.46
Otop1Q80VM9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Otop1Q80VM9 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Otop1Q80VM9 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.17■■□□□ 1.46
Otop1Q80VM9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Otop1Q80VM9 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Otop1Q80VM9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Otop1Q80VM9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.15■■□□□ 1.46
Otop1Q80VM9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC24.15■■□□□ 1.46
Otop1Q80VM9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Otop1Q80VM9 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.14■■□□□ 1.45
Otop1Q80VM9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Otop1Q80VM9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Otop1Q80VM9 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Otop1Q80VM9 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Otop1Q80VM9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Otop1Q80VM9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Otop1Q80VM9 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
Otop1Q80VM9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
Otop1Q80VM9 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
Otop1Q80VM9 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Otop1Q80VM9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Otop1Q80VM9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Otop1Q80VM9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Otop1Q80VM9 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Otop1Q80VM9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC24.08■■□□□ 1.45
Otop1Q80VM9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Otop1Q80VM9 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Otop1Q80VM9 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Otop1Q80VM9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Otop1Q80VM9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.05■■□□□ 1.44
Otop1Q80VM9 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.05■■□□□ 1.44
Otop1Q80VM9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
Otop1Q80VM9 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Otop1Q80VM9 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Otop1Q80VM9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Otop1Q80VM9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Otop1Q80VM9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Otop1Q80VM9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Otop1Q80VM9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Otop1Q80VM9 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Otop1Q80VM9 Nkain2-201ENSMUST00000092602 558 ntBASIC24.01■■□□□ 1.43
Otop1Q80VM9 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC24■■□□□ 1.43
Otop1Q80VM9 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
Otop1Q80VM9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24■■□□□ 1.43
Otop1Q80VM9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.99■■□□□ 1.43
Otop1Q80VM9 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
Otop1Q80VM9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Otop1Q80VM9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.98■■□□□ 1.43
Otop1Q80VM9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms