Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Trim62Q80V85 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Trim62Q80V85 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Trim62Q80V85 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
Trim62Q80V85 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Trim62Q80V85 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Trim62Q80V85 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Trim62Q80V85 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Trim62Q80V85 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.44■■□□□ 1.82
Trim62Q80V85 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Trim62Q80V85 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
Trim62Q80V85 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
Trim62Q80V85 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Trim62Q80V85 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
Trim62Q80V85 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26.4■■□□□ 1.82
Trim62Q80V85 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
Trim62Q80V85 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Trim62Q80V85 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Trim62Q80V85 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Trim62Q80V85 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
Trim62Q80V85 Tdp2-203ENSMUST00000223804 1136 ntBASIC26.36■■□□□ 1.81
Trim62Q80V85 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Trim62Q80V85 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.35■■□□□ 1.81
Trim62Q80V85 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Trim62Q80V85 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Trim62Q80V85 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC26.34■■□□□ 1.81
Trim62Q80V85 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Trim62Q80V85 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
Trim62Q80V85 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
Trim62Q80V85 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Trim62Q80V85 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.31■■□□□ 1.8
Trim62Q80V85 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Trim62Q80V85 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26.29■■□□□ 1.8
Trim62Q80V85 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Trim62Q80V85 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Trim62Q80V85 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Trim62Q80V85 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Trim62Q80V85 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Trim62Q80V85 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Trim62Q80V85 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Trim62Q80V85 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Trim62Q80V85 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.22■■□□□ 1.79
Trim62Q80V85 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.22■■□□□ 1.79
Trim62Q80V85 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Trim62Q80V85 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Trim62Q80V85 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC26.17■■□□□ 1.78
Trim62Q80V85 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Trim62Q80V85 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Trim62Q80V85 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Trim62Q80V85 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.13■■□□□ 1.77
Trim62Q80V85 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Trim62Q80V85 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Trim62Q80V85 Gm6345-201ENSMUST00000180378 1691 ntBASIC26.1■■□□□ 1.77
Trim62Q80V85 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Trim62Q80V85 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.1■■□□□ 1.77
Trim62Q80V85 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Trim62Q80V85 Gm9397-201ENSMUST00000200125 605 ntBASIC26.09■■□□□ 1.77
Trim62Q80V85 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26.09■■□□□ 1.77
Trim62Q80V85 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Trim62Q80V85 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.08■■□□□ 1.77
Trim62Q80V85 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Trim62Q80V85 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Trim62Q80V85 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Trim62Q80V85 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Trim62Q80V85 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
Trim62Q80V85 Gm45855-201ENSMUST00000212546 880 ntBASIC26.04■■□□□ 1.76
Trim62Q80V85 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Trim62Q80V85 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Trim62Q80V85 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
Trim62Q80V85 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Trim62Q80V85 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Trim62Q80V85 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Trim62Q80V85 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Trim62Q80V85 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
Trim62Q80V85 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
Trim62Q80V85 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Trim62Q80V85 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26■■□□□ 1.75
Trim62Q80V85 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Trim62Q80V85 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Trim62Q80V85 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.99■■□□□ 1.75
Trim62Q80V85 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Trim62Q80V85 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.98■■□□□ 1.75
Trim62Q80V85 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
Trim62Q80V85 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Trim62Q80V85 Gm24970-201ENSMUST00000175582 82 ntBASIC25.97■■□□□ 1.75
Trim62Q80V85 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Trim62Q80V85 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.95■■□□□ 1.75
Trim62Q80V85 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.75
Trim62Q80V85 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.95■■□□□ 1.74
Trim62Q80V85 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trim62Q80V85 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trim62Q80V85 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Trim62Q80V85 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC25.93■■□□□ 1.74
Trim62Q80V85 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Trim62Q80V85 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
Trim62Q80V85 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC25.91■■□□□ 1.74
Trim62Q80V85 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Trim62Q80V85 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.74
Trim62Q80V85 Gm43863-201ENSMUST00000203822 1192 ntBASIC25.88■■□□□ 1.73
Trim62Q80V85 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms