Protein–RNA interactions for Protein: Q80TY5

Vps13b, Vacuolar protein sorting-associated protein 13B, mousemouse

Predictions only

Length 3,993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13bQ80TY5 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Vps13bQ80TY5 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps13bQ80TY5 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC15.96■□□□□ 0.15
Vps13bQ80TY5 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vps13bQ80TY5 Gm42809-201ENSMUST00000198429 1138 ntBASIC15.94■□□□□ 0.14
Vps13bQ80TY5 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps13bQ80TY5 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps13bQ80TY5 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC15.9■□□□□ 0.14
Vps13bQ80TY5 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC15.9■□□□□ 0.14
Vps13bQ80TY5 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC15.9■□□□□ 0.14
Vps13bQ80TY5 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Vps13bQ80TY5 AC157572.2-201ENSMUST00000226970 908 ntBASIC15.9■□□□□ 0.14
Vps13bQ80TY5 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Vps13bQ80TY5 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps13bQ80TY5 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC15.88■□□□□ 0.13
Vps13bQ80TY5 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps13bQ80TY5 Mir6538-201ENSMUST00000183713 110 ntBASIC15.87■□□□□ 0.13
Vps13bQ80TY5 Gm43863-201ENSMUST00000203822 1192 ntBASIC15.87■□□□□ 0.13
Vps13bQ80TY5 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps13bQ80TY5 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Vps13bQ80TY5 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vps13bQ80TY5 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC15.86■□□□□ 0.13
Vps13bQ80TY5 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC15.86■□□□□ 0.13
Vps13bQ80TY5 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps13bQ80TY5 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Vps13bQ80TY5 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vps13bQ80TY5 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vps13bQ80TY5 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vps13bQ80TY5 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC15.84■□□□□ 0.13
Vps13bQ80TY5 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vps13bQ80TY5 Gm7432-201ENSMUST00000210343 879 ntBASIC15.83■□□□□ 0.13
Vps13bQ80TY5 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Vps13bQ80TY5 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps13bQ80TY5 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps13bQ80TY5 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC15.83■□□□□ 0.12
Vps13bQ80TY5 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC15.83■□□□□ 0.12
Vps13bQ80TY5 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC15.82■□□□□ 0.12
Vps13bQ80TY5 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
Vps13bQ80TY5 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps13bQ80TY5 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Vps13bQ80TY5 Gm11175-201ENSMUST00000116172 543 ntBASIC15.8■□□□□ 0.12
Vps13bQ80TY5 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps13bQ80TY5 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vps13bQ80TY5 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Vps13bQ80TY5 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Vps13bQ80TY5 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC15.76■□□□□ 0.11
Vps13bQ80TY5 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps13bQ80TY5 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps13bQ80TY5 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Vps13bQ80TY5 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps13bQ80TY5 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps13bQ80TY5 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps13bQ80TY5 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps13bQ80TY5 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC15.73■□□□□ 0.11
Vps13bQ80TY5 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps13bQ80TY5 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps13bQ80TY5 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps13bQ80TY5 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps13bQ80TY5 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vps13bQ80TY5 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
Vps13bQ80TY5 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps13bQ80TY5 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vps13bQ80TY5 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vps13bQ80TY5 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps13bQ80TY5 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps13bQ80TY5 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vps13bQ80TY5 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vps13bQ80TY5 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Vps13bQ80TY5 Gm11599-201ENSMUST00000118720 878 ntBASIC15.66■□□□□ 0.1
Vps13bQ80TY5 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vps13bQ80TY5 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Vps13bQ80TY5 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps13bQ80TY5 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps13bQ80TY5 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC15.64■□□□□ 0.09
Vps13bQ80TY5 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC15.63■□□□□ 0.09
Vps13bQ80TY5 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC15.63■□□□□ 0.09
Vps13bQ80TY5 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps13bQ80TY5 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vps13bQ80TY5 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC15.63■□□□□ 0.09
Vps13bQ80TY5 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Vps13bQ80TY5 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Vps13bQ80TY5 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Vps13bQ80TY5 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Vps13bQ80TY5 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps13bQ80TY5 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps13bQ80TY5 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps13bQ80TY5 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps13bQ80TY5 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vps13bQ80TY5 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps13bQ80TY5 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps13bQ80TY5 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Vps13bQ80TY5 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Vps13bQ80TY5 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps13bQ80TY5 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vps13bQ80TY5 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.09
Vps13bQ80TY5 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps13bQ80TY5 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
Vps13bQ80TY5 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Vps13bQ80TY5 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps13bQ80TY5 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms