Protein–RNA interactions for Protein: Q7TN05

Ap1s3, AP-1 complex subunit sigma-3, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap1s3Q7TN05 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Ap1s3Q7TN05 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.92■■□□□ 1.1
Ap1s3Q7TN05 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.92■■□□□ 1.1
Ap1s3Q7TN05 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Ap1s3Q7TN05 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ap1s3Q7TN05 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ap1s3Q7TN05 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ap1s3Q7TN05 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ap1s3Q7TN05 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ap1s3Q7TN05 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ap1s3Q7TN05 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ap1s3Q7TN05 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ap1s3Q7TN05 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ap1s3Q7TN05 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Ap1s3Q7TN05 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ap1s3Q7TN05 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.85■■□□□ 1.09
Ap1s3Q7TN05 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ap1s3Q7TN05 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ap1s3Q7TN05 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
Ap1s3Q7TN05 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ap1s3Q7TN05 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ap1s3Q7TN05 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ap1s3Q7TN05 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Ap1s3Q7TN05 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ap1s3Q7TN05 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ap1s3Q7TN05 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Ap1s3Q7TN05 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ap1s3Q7TN05 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ap1s3Q7TN05 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ap1s3Q7TN05 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ap1s3Q7TN05 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ap1s3Q7TN05 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ap1s3Q7TN05 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.79■■□□□ 1.08
Ap1s3Q7TN05 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ap1s3Q7TN05 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ap1s3Q7TN05 Amer2-203ENSMUST00000225247 2662 ntBASIC21.79■■□□□ 1.08
Ap1s3Q7TN05 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
Ap1s3Q7TN05 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Ap1s3Q7TN05 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.74■■□□□ 1.07
Ap1s3Q7TN05 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ap1s3Q7TN05 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ap1s3Q7TN05 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ap1s3Q7TN05 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ap1s3Q7TN05 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ap1s3Q7TN05 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ap1s3Q7TN05 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ap1s3Q7TN05 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ap1s3Q7TN05 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ap1s3Q7TN05 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Ap1s3Q7TN05 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.7■■□□□ 1.06
Ap1s3Q7TN05 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ap1s3Q7TN05 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ap1s3Q7TN05 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ap1s3Q7TN05 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ap1s3Q7TN05 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.67■■□□□ 1.06
Ap1s3Q7TN05 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ap1s3Q7TN05 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.66■■□□□ 1.06
Ap1s3Q7TN05 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ap1s3Q7TN05 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ap1s3Q7TN05 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Ap1s3Q7TN05 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Ap1s3Q7TN05 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ap1s3Q7TN05 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ap1s3Q7TN05 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Ap1s3Q7TN05 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ap1s3Q7TN05 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ap1s3Q7TN05 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ap1s3Q7TN05 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ap1s3Q7TN05 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.6■■□□□ 1.05
Ap1s3Q7TN05 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ap1s3Q7TN05 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Ap1s3Q7TN05 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Ap1s3Q7TN05 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ap1s3Q7TN05 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ap1s3Q7TN05 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ap1s3Q7TN05 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ap1s3Q7TN05 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ap1s3Q7TN05 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.54■■□□□ 1.04
Ap1s3Q7TN05 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ap1s3Q7TN05 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ap1s3Q7TN05 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ap1s3Q7TN05 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Ap1s3Q7TN05 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ap1s3Q7TN05 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ap1s3Q7TN05 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.52■■□□□ 1.04
Ap1s3Q7TN05 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ap1s3Q7TN05 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.52■■□□□ 1.04
Ap1s3Q7TN05 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ap1s3Q7TN05 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ap1s3Q7TN05 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ap1s3Q7TN05 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ap1s3Q7TN05 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Ap1s3Q7TN05 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ap1s3Q7TN05 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ap1s3Q7TN05 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Ap1s3Q7TN05 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ap1s3Q7TN05 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Ap1s3Q7TN05 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ap1s3Q7TN05 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Ap1s3Q7TN05 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms