Protein–RNA interactions for Protein: Q78PG9

Ccdc25, Coiled-coil domain-containing protein 25, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc25Q78PG9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
Ccdc25Q78PG9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26.18■■□□□ 1.78
Ccdc25Q78PG9 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ccdc25Q78PG9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.77
Ccdc25Q78PG9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ccdc25Q78PG9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ccdc25Q78PG9 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Ccdc25Q78PG9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Ccdc25Q78PG9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
Ccdc25Q78PG9 Gm6345-201ENSMUST00000180378 1691 ntBASIC26.11■■□□□ 1.77
Ccdc25Q78PG9 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ccdc25Q78PG9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Ccdc25Q78PG9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Ccdc25Q78PG9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Ccdc25Q78PG9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.1■■□□□ 1.77
Ccdc25Q78PG9 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ccdc25Q78PG9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ccdc25Q78PG9 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
Ccdc25Q78PG9 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Ccdc25Q78PG9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ccdc25Q78PG9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Ccdc25Q78PG9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
Ccdc25Q78PG9 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Ccdc25Q78PG9 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC26.05■■□□□ 1.76
Ccdc25Q78PG9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Ccdc25Q78PG9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Ccdc25Q78PG9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Ccdc25Q78PG9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Ccdc25Q78PG9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ccdc25Q78PG9 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.02■■□□□ 1.76
Ccdc25Q78PG9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC26.02■■□□□ 1.76
Ccdc25Q78PG9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Ccdc25Q78PG9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
Ccdc25Q78PG9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
Ccdc25Q78PG9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26■■□□□ 1.75
Ccdc25Q78PG9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Ccdc25Q78PG9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC25.98■■□□□ 1.75
Ccdc25Q78PG9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ccdc25Q78PG9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ccdc25Q78PG9 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Ccdc25Q78PG9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ccdc25Q78PG9 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Ccdc25Q78PG9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.96■■□□□ 1.75
Ccdc25Q78PG9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Ccdc25Q78PG9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Ccdc25Q78PG9 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.94■■□□□ 1.74
Ccdc25Q78PG9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Ccdc25Q78PG9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Ccdc25Q78PG9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25.94■■□□□ 1.74
Ccdc25Q78PG9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
Ccdc25Q78PG9 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC25.92■■□□□ 1.74
Ccdc25Q78PG9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC25.92■■□□□ 1.74
Ccdc25Q78PG9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Ccdc25Q78PG9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
Ccdc25Q78PG9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Ccdc25Q78PG9 Gm27322-201ENSMUST00000184007 104 ntBASIC25.91■■□□□ 1.74
Ccdc25Q78PG9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
Ccdc25Q78PG9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Ccdc25Q78PG9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC25.9■■□□□ 1.74
Ccdc25Q78PG9 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Ccdc25Q78PG9 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.89■■□□□ 1.74
Ccdc25Q78PG9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
Ccdc25Q78PG9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Ccdc25Q78PG9 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.88■■□□□ 1.73
Ccdc25Q78PG9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Ccdc25Q78PG9 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
Ccdc25Q78PG9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Ccdc25Q78PG9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Ccdc25Q78PG9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC25.87■■□□□ 1.73
Ccdc25Q78PG9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Ccdc25Q78PG9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Ccdc25Q78PG9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Ccdc25Q78PG9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Ccdc25Q78PG9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.85■■□□□ 1.73
Ccdc25Q78PG9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Ccdc25Q78PG9 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Ccdc25Q78PG9 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Ccdc25Q78PG9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Ccdc25Q78PG9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Ccdc25Q78PG9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Ccdc25Q78PG9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ccdc25Q78PG9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ccdc25Q78PG9 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ccdc25Q78PG9 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ccdc25Q78PG9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.81■■□□□ 1.72
Ccdc25Q78PG9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
Ccdc25Q78PG9 Gm30346-201ENSMUST00000218641 1699 ntBASIC25.8■■□□□ 1.72
Ccdc25Q78PG9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Ccdc25Q78PG9 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Ccdc25Q78PG9 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
Ccdc25Q78PG9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.76■■□□□ 1.71
Ccdc25Q78PG9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Ccdc25Q78PG9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.75■■□□□ 1.71
Ccdc25Q78PG9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Ccdc25Q78PG9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Ccdc25Q78PG9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
Ccdc25Q78PG9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Ccdc25Q78PG9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Ccdc25Q78PG9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Ccdc25Q78PG9 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms