Protein–RNA interactions for Protein: Q6W8Q3

Pcp4l1, Purkinje cell protein 4-like protein 1, mousemouse

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcp4l1Q6W8Q3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcp4l1Q6W8Q3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcp4l1Q6W8Q3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcp4l1Q6W8Q3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcp4l1Q6W8Q3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcp4l1Q6W8Q3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Pcp4l1Q6W8Q3 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcp4l1Q6W8Q3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcp4l1Q6W8Q3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcp4l1Q6W8Q3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcp4l1Q6W8Q3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcp4l1Q6W8Q3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Pcp4l1Q6W8Q3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcp4l1Q6W8Q3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcp4l1Q6W8Q3 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcp4l1Q6W8Q3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcp4l1Q6W8Q3 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Pcp4l1Q6W8Q3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcp4l1Q6W8Q3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Pcp4l1Q6W8Q3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Pcp4l1Q6W8Q3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Pcp4l1Q6W8Q3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Pcp4l1Q6W8Q3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcp4l1Q6W8Q3 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.73■□□□□ 0.91
Pcp4l1Q6W8Q3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcp4l1Q6W8Q3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcp4l1Q6W8Q3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Pcp4l1Q6W8Q3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.73■□□□□ 0.91
Pcp4l1Q6W8Q3 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcp4l1Q6W8Q3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcp4l1Q6W8Q3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.7■□□□□ 0.9
Pcp4l1Q6W8Q3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcp4l1Q6W8Q3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcp4l1Q6W8Q3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcp4l1Q6W8Q3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Pcp4l1Q6W8Q3 Amer2-203ENSMUST00000225247 2662 ntBASIC20.67■□□□□ 0.9
Pcp4l1Q6W8Q3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcp4l1Q6W8Q3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcp4l1Q6W8Q3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.65■□□□□ 0.9
Pcp4l1Q6W8Q3 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcp4l1Q6W8Q3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcp4l1Q6W8Q3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcp4l1Q6W8Q3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcp4l1Q6W8Q3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcp4l1Q6W8Q3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.64■□□□□ 0.89
Pcp4l1Q6W8Q3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcp4l1Q6W8Q3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Pcp4l1Q6W8Q3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Pcp4l1Q6W8Q3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
Pcp4l1Q6W8Q3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcp4l1Q6W8Q3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcp4l1Q6W8Q3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcp4l1Q6W8Q3 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcp4l1Q6W8Q3 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Pcp4l1Q6W8Q3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcp4l1Q6W8Q3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcp4l1Q6W8Q3 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcp4l1Q6W8Q3 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.57■□□□□ 0.88
Pcp4l1Q6W8Q3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcp4l1Q6W8Q3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcp4l1Q6W8Q3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcp4l1Q6W8Q3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcp4l1Q6W8Q3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcp4l1Q6W8Q3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcp4l1Q6W8Q3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Pcp4l1Q6W8Q3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcp4l1Q6W8Q3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Pcp4l1Q6W8Q3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcp4l1Q6W8Q3 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.54■□□□□ 0.88
Pcp4l1Q6W8Q3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcp4l1Q6W8Q3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcp4l1Q6W8Q3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcp4l1Q6W8Q3 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.52■□□□□ 0.88
Pcp4l1Q6W8Q3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Pcp4l1Q6W8Q3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.51■□□□□ 0.87
Pcp4l1Q6W8Q3 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Pcp4l1Q6W8Q3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcp4l1Q6W8Q3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcp4l1Q6W8Q3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcp4l1Q6W8Q3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcp4l1Q6W8Q3 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcp4l1Q6W8Q3 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
Pcp4l1Q6W8Q3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcp4l1Q6W8Q3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Pcp4l1Q6W8Q3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcp4l1Q6W8Q3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.47■□□□□ 0.87
Pcp4l1Q6W8Q3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.47■□□□□ 0.87
Pcp4l1Q6W8Q3 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Pcp4l1Q6W8Q3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Pcp4l1Q6W8Q3 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.46■□□□□ 0.87
Pcp4l1Q6W8Q3 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcp4l1Q6W8Q3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcp4l1Q6W8Q3 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcp4l1Q6W8Q3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Pcp4l1Q6W8Q3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcp4l1Q6W8Q3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcp4l1Q6W8Q3 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcp4l1Q6W8Q3 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcp4l1Q6W8Q3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Pcp4l1Q6W8Q3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms