Protein–RNA interactions for Protein: Q6PDM1

Msl1, Male-specific lethal 1 homolog, mousemouse

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msl1Q6PDM1 Gm43863-201ENSMUST00000203822 1192 ntBASIC32.55■■■□□ 2.8
Msl1Q6PDM1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Msl1Q6PDM1 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC32.53■■■□□ 2.8
Msl1Q6PDM1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Msl1Q6PDM1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC32.5■■■□□ 2.79
Msl1Q6PDM1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
Msl1Q6PDM1 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
Msl1Q6PDM1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
Msl1Q6PDM1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Msl1Q6PDM1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
Msl1Q6PDM1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
Msl1Q6PDM1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC32.42■■■□□ 2.78
Msl1Q6PDM1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Msl1Q6PDM1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC32.41■■■□□ 2.78
Msl1Q6PDM1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Msl1Q6PDM1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC32.4■■■□□ 2.78
Msl1Q6PDM1 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC32.4■■■□□ 2.78
Msl1Q6PDM1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Msl1Q6PDM1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC32.38■■■□□ 2.77
Msl1Q6PDM1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
Msl1Q6PDM1 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC32.34■■■□□ 2.77
Msl1Q6PDM1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Msl1Q6PDM1 Gm42809-201ENSMUST00000198429 1138 ntBASIC32.33■■■□□ 2.77
Msl1Q6PDM1 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Msl1Q6PDM1 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Msl1Q6PDM1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC32.3■■■□□ 2.76
Msl1Q6PDM1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC32.29■■■□□ 2.76
Msl1Q6PDM1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC32.29■■■□□ 2.76
Msl1Q6PDM1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC32.28■■■□□ 2.76
Msl1Q6PDM1 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC32.27■■■□□ 2.76
Msl1Q6PDM1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Msl1Q6PDM1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Msl1Q6PDM1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC32.24■■■□□ 2.75
Msl1Q6PDM1 AC157572.2-201ENSMUST00000226970 908 ntBASIC32.24■■■□□ 2.75
Msl1Q6PDM1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Msl1Q6PDM1 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Msl1Q6PDM1 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
Msl1Q6PDM1 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC32.22■■■□□ 2.75
Msl1Q6PDM1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
Msl1Q6PDM1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
Msl1Q6PDM1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC32.22■■■□□ 2.75
Msl1Q6PDM1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Msl1Q6PDM1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Msl1Q6PDM1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC32.19■■■□□ 2.74
Msl1Q6PDM1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
Msl1Q6PDM1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC32.18■■■□□ 2.74
Msl1Q6PDM1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC32.15■■■□□ 2.74
Msl1Q6PDM1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Msl1Q6PDM1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC32.12■■■□□ 2.73
Msl1Q6PDM1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
Msl1Q6PDM1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC32.12■■■□□ 2.73
Msl1Q6PDM1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Msl1Q6PDM1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Msl1Q6PDM1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Msl1Q6PDM1 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC32.06■■■□□ 2.72
Msl1Q6PDM1 Nkain2-201ENSMUST00000092602 558 ntBASIC32.05■■■□□ 2.72
Msl1Q6PDM1 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Msl1Q6PDM1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Msl1Q6PDM1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC32.04■■■□□ 2.72
Msl1Q6PDM1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
Msl1Q6PDM1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC32.04■■■□□ 2.72
Msl1Q6PDM1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC32.03■■■□□ 2.72
Msl1Q6PDM1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Msl1Q6PDM1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC32.02■■■□□ 2.72
Msl1Q6PDM1 Gm7432-201ENSMUST00000210343 879 ntBASIC32.01■■■□□ 2.71
Msl1Q6PDM1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Msl1Q6PDM1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Msl1Q6PDM1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC31.99■■■□□ 2.71
Msl1Q6PDM1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC31.99■■■□□ 2.71
Msl1Q6PDM1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
Msl1Q6PDM1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Msl1Q6PDM1 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
Msl1Q6PDM1 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.7
Msl1Q6PDM1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC31.94■■■□□ 2.7
Msl1Q6PDM1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC31.93■■■□□ 2.7
Msl1Q6PDM1 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC31.93■■■□□ 2.7
Msl1Q6PDM1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Msl1Q6PDM1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31.93■■■□□ 2.7
Msl1Q6PDM1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC31.91■■■□□ 2.7
Msl1Q6PDM1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Msl1Q6PDM1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC31.9■■■□□ 2.7
Msl1Q6PDM1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
Msl1Q6PDM1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC31.88■■■□□ 2.69
Msl1Q6PDM1 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Msl1Q6PDM1 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC31.88■■■□□ 2.69
Msl1Q6PDM1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Msl1Q6PDM1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Msl1Q6PDM1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Msl1Q6PDM1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Msl1Q6PDM1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Msl1Q6PDM1 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Msl1Q6PDM1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Msl1Q6PDM1 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Msl1Q6PDM1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
Msl1Q6PDM1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Msl1Q6PDM1 Gm11175-201ENSMUST00000116172 543 ntBASIC31.77■■■□□ 2.68
Msl1Q6PDM1 Gm11599-201ENSMUST00000118720 878 ntBASIC31.77■■■□□ 2.68
Msl1Q6PDM1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.77■■■□□ 2.68
Msl1Q6PDM1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC31.76■■■□□ 2.67
Msl1Q6PDM1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms