Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Pdzrn3Q69ZS0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC31.53■■■□□ 2.64
Pdzrn3Q69ZS0 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Pdzrn3Q69ZS0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC31.51■■■□□ 2.63
Pdzrn3Q69ZS0 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Pdzrn3Q69ZS0 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC31.48■■■□□ 2.63
Pdzrn3Q69ZS0 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Pdzrn3Q69ZS0 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Pdzrn3Q69ZS0 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Pdzrn3Q69ZS0 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC31.41■■■□□ 2.62
Pdzrn3Q69ZS0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Pdzrn3Q69ZS0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Pdzrn3Q69ZS0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC31.4■■■□□ 2.62
Pdzrn3Q69ZS0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Pdzrn3Q69ZS0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Pdzrn3Q69ZS0 Gm24970-201ENSMUST00000175582 82 ntBASIC31.37■■■□□ 2.61
Pdzrn3Q69ZS0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Pdzrn3Q69ZS0 Gm6658-202ENSMUST00000209493 1885 ntBASIC31.35■■■□□ 2.61
Pdzrn3Q69ZS0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC31.33■■■□□ 2.61
Pdzrn3Q69ZS0 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Pdzrn3Q69ZS0 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
Pdzrn3Q69ZS0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
Pdzrn3Q69ZS0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC31.31■■■□□ 2.6
Pdzrn3Q69ZS0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC31.3■■■□□ 2.6
Pdzrn3Q69ZS0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Pdzrn3Q69ZS0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC31.28■■■□□ 2.6
Pdzrn3Q69ZS0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC31.24■■■□□ 2.59
Pdzrn3Q69ZS0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
Pdzrn3Q69ZS0 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Pdzrn3Q69ZS0 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
Pdzrn3Q69ZS0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC31.2■■■□□ 2.58
Pdzrn3Q69ZS0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Pdzrn3Q69ZS0 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Pdzrn3Q69ZS0 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Pdzrn3Q69ZS0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Pdzrn3Q69ZS0 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Pdzrn3Q69ZS0 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Pdzrn3Q69ZS0 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC31.14■■■□□ 2.58
Pdzrn3Q69ZS0 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC31.13■■■□□ 2.57
Pdzrn3Q69ZS0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Pdzrn3Q69ZS0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Pdzrn3Q69ZS0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Pdzrn3Q69ZS0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Pdzrn3Q69ZS0 Gm5987-201ENSMUST00000196433 1151 ntBASIC31.09■■■□□ 2.57
Pdzrn3Q69ZS0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC31.08■■■□□ 2.57
Pdzrn3Q69ZS0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Pdzrn3Q69ZS0 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Pdzrn3Q69ZS0 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Pdzrn3Q69ZS0 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC31.06■■■□□ 2.56
Pdzrn3Q69ZS0 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
Pdzrn3Q69ZS0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC31.05■■■□□ 2.56
Pdzrn3Q69ZS0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC31.03■■■□□ 2.56
Pdzrn3Q69ZS0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC31.03■■■□□ 2.56
Pdzrn3Q69ZS0 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
Pdzrn3Q69ZS0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
Pdzrn3Q69ZS0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
Pdzrn3Q69ZS0 Gm9939-201ENSMUST00000067161 1154 ntBASIC31■■■□□ 2.55
Pdzrn3Q69ZS0 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
Pdzrn3Q69ZS0 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC30.98■■■□□ 2.55
Pdzrn3Q69ZS0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Pdzrn3Q69ZS0 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Pdzrn3Q69ZS0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Pdzrn3Q69ZS0 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC30.94■■■□□ 2.54
Pdzrn3Q69ZS0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
Pdzrn3Q69ZS0 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Pdzrn3Q69ZS0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
Pdzrn3Q69ZS0 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Pdzrn3Q69ZS0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Pdzrn3Q69ZS0 Gm8503-201ENSMUST00000118131 455 ntBASIC30.91■■■□□ 2.54
Pdzrn3Q69ZS0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Pdzrn3Q69ZS0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC30.9■■■□□ 2.54
Pdzrn3Q69ZS0 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
Pdzrn3Q69ZS0 Gm43863-201ENSMUST00000203822 1192 ntBASIC30.9■■■□□ 2.54
Pdzrn3Q69ZS0 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
Pdzrn3Q69ZS0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC30.87■■■□□ 2.53
Pdzrn3Q69ZS0 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC30.86■■■□□ 2.53
Pdzrn3Q69ZS0 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC30.84■■■□□ 2.53
Pdzrn3Q69ZS0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Pdzrn3Q69ZS0 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Pdzrn3Q69ZS0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Pdzrn3Q69ZS0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Pdzrn3Q69ZS0 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Pdzrn3Q69ZS0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Pdzrn3Q69ZS0 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Pdzrn3Q69ZS0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Pdzrn3Q69ZS0 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
Pdzrn3Q69ZS0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC30.79■■■□□ 2.52
Pdzrn3Q69ZS0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC30.79■■■□□ 2.52
Pdzrn3Q69ZS0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC30.79■■■□□ 2.52
Pdzrn3Q69ZS0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
Pdzrn3Q69ZS0 Gm6821-201ENSMUST00000107540 542 ntBASIC30.78■■■□□ 2.52
Pdzrn3Q69ZS0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC30.78■■■□□ 2.52
Pdzrn3Q69ZS0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC30.78■■■□□ 2.52
Pdzrn3Q69ZS0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC30.77■■■□□ 2.52
Pdzrn3Q69ZS0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.51
Pdzrn3Q69ZS0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Pdzrn3Q69ZS0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Pdzrn3Q69ZS0 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
Pdzrn3Q69ZS0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Pdzrn3Q69ZS0 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms