Protein–RNA interactions for Protein: Q62504

Spen, Msx2-interacting protein, mousemouse

Known RBP Predictions only

Length 3,644 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpenQ62504 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SpenQ62504 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
SpenQ62504 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SpenQ62504 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.52■■□□□ 1.36
SpenQ62504 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
SpenQ62504 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SpenQ62504 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SpenQ62504 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
SpenQ62504 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.5■■□□□ 1.35
SpenQ62504 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
SpenQ62504 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
SpenQ62504 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
SpenQ62504 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
SpenQ62504 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SpenQ62504 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SpenQ62504 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
SpenQ62504 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.36■■□□□ 1.33
SpenQ62504 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC23.36■■□□□ 1.33
SpenQ62504 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SpenQ62504 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.36■■□□□ 1.33
SpenQ62504 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.32■■□□□ 1.32
SpenQ62504 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SpenQ62504 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.31■■□□□ 1.32
SpenQ62504 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SpenQ62504 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
SpenQ62504 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.3■■□□□ 1.32
SpenQ62504 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.3■■□□□ 1.32
SpenQ62504 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
SpenQ62504 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.28■■□□□ 1.32
SpenQ62504 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SpenQ62504 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
SpenQ62504 Mir6538-201ENSMUST00000183713 110 ntBASIC23.28■■□□□ 1.32
SpenQ62504 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.27■■□□□ 1.32
SpenQ62504 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
SpenQ62504 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.25■■□□□ 1.31
SpenQ62504 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SpenQ62504 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SpenQ62504 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
SpenQ62504 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SpenQ62504 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.22■■□□□ 1.31
SpenQ62504 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SpenQ62504 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.21■■□□□ 1.31
SpenQ62504 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
SpenQ62504 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SpenQ62504 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
SpenQ62504 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SpenQ62504 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SpenQ62504 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SpenQ62504 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC23.18■■□□□ 1.3
SpenQ62504 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.18■■□□□ 1.3
SpenQ62504 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SpenQ62504 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.17■■□□□ 1.3
SpenQ62504 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SpenQ62504 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SpenQ62504 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.15■■□□□ 1.3
SpenQ62504 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SpenQ62504 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.14■■□□□ 1.29
SpenQ62504 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SpenQ62504 Gm11175-201ENSMUST00000116172 543 ntBASIC23.12■■□□□ 1.29
SpenQ62504 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
SpenQ62504 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SpenQ62504 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SpenQ62504 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SpenQ62504 Gm7432-201ENSMUST00000210343 879 ntBASIC23.1■■□□□ 1.29
SpenQ62504 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SpenQ62504 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SpenQ62504 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SpenQ62504 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
SpenQ62504 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SpenQ62504 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SpenQ62504 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.08■■□□□ 1.28
SpenQ62504 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
SpenQ62504 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
SpenQ62504 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SpenQ62504 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SpenQ62504 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SpenQ62504 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
SpenQ62504 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.27
SpenQ62504 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SpenQ62504 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
SpenQ62504 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SpenQ62504 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SpenQ62504 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SpenQ62504 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23■■□□□ 1.27
SpenQ62504 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SpenQ62504 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23■■□□□ 1.27
SpenQ62504 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
SpenQ62504 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SpenQ62504 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SpenQ62504 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SpenQ62504 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SpenQ62504 Cap2-205ENSMUST00000225824 1634 ntBASIC22.96■■□□□ 1.27
SpenQ62504 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SpenQ62504 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
SpenQ62504 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SpenQ62504 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.93■■□□□ 1.26
SpenQ62504 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
SpenQ62504 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SpenQ62504 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SpenQ62504 Gm11599-201ENSMUST00000118720 878 ntBASIC22.92■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms