Protein–RNA interactions for Protein: Q62249

Sox19, Protein SOX-19 (Fragment), mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox19Q62249 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Sox19Q62249 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Sox19Q62249 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Sox19Q62249 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sox19Q62249 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sox19Q62249 Amer2-203ENSMUST00000225247 2662 ntBASIC21.41■■□□□ 1.02
Sox19Q62249 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Sox19Q62249 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sox19Q62249 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sox19Q62249 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Sox19Q62249 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
Sox19Q62249 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.38■■□□□ 1.01
Sox19Q62249 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sox19Q62249 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Sox19Q62249 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sox19Q62249 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.36■■□□□ 1.01
Sox19Q62249 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Sox19Q62249 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Sox19Q62249 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Sox19Q62249 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Sox19Q62249 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Sox19Q62249 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.32■■□□□ 1
Sox19Q62249 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.31■■□□□ 1
Sox19Q62249 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sox19Q62249 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.31■■□□□ 1
Sox19Q62249 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sox19Q62249 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Sox19Q62249 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.29■■□□□ 1
Sox19Q62249 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sox19Q62249 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sox19Q62249 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sox19Q62249 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sox19Q62249 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Sox19Q62249 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sox19Q62249 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Sox19Q62249 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sox19Q62249 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sox19Q62249 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.25■□□□□ 0.99
Sox19Q62249 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sox19Q62249 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Sox19Q62249 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.24■□□□□ 0.99
Sox19Q62249 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Sox19Q62249 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.23■□□□□ 0.99
Sox19Q62249 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sox19Q62249 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Sox19Q62249 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sox19Q62249 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Sox19Q62249 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sox19Q62249 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sox19Q62249 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sox19Q62249 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sox19Q62249 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sox19Q62249 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sox19Q62249 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sox19Q62249 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.18■□□□□ 0.98
Sox19Q62249 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sox19Q62249 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sox19Q62249 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sox19Q62249 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Sox19Q62249 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sox19Q62249 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.16■□□□□ 0.98
Sox19Q62249 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sox19Q62249 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sox19Q62249 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.14■□□□□ 0.97
Sox19Q62249 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sox19Q62249 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sox19Q62249 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sox19Q62249 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
Sox19Q62249 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.12■□□□□ 0.97
Sox19Q62249 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox19Q62249 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.11■□□□□ 0.97
Sox19Q62249 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
Sox19Q62249 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox19Q62249 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sox19Q62249 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sox19Q62249 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sox19Q62249 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sox19Q62249 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.09■□□□□ 0.97
Sox19Q62249 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sox19Q62249 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.09■□□□□ 0.97
Sox19Q62249 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sox19Q62249 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sox19Q62249 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Sox19Q62249 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Sox19Q62249 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sox19Q62249 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sox19Q62249 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sox19Q62249 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.05■□□□□ 0.96
Sox19Q62249 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sox19Q62249 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sox19Q62249 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.03■□□□□ 0.96
Sox19Q62249 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sox19Q62249 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.02■□□□□ 0.96
Sox19Q62249 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Sox19Q62249 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sox19Q62249 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21■□□□□ 0.95
Sox19Q62249 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sox19Q62249 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sox19Q62249 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sox19Q62249 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms