Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm9397-201ENSMUST00000200125 605 ntBASIC29.9■■■□□ 2.38
Rc3h1Q4VGL6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC29.9■■■□□ 2.38
Rc3h1Q4VGL6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Rc3h1Q4VGL6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.37
Rc3h1Q4VGL6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC29.89■■■□□ 2.37
Rc3h1Q4VGL6 Gm6658-202ENSMUST00000209493 1885 ntBASIC29.88■■■□□ 2.37
Rc3h1Q4VGL6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC29.88■■■□□ 2.37
Rc3h1Q4VGL6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Rc3h1Q4VGL6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Rc3h1Q4VGL6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Rc3h1Q4VGL6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC29.85■■■□□ 2.37
Rc3h1Q4VGL6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC29.84■■■□□ 2.37
Rc3h1Q4VGL6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Rc3h1Q4VGL6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC29.84■■■□□ 2.37
Rc3h1Q4VGL6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC29.84■■■□□ 2.37
Rc3h1Q4VGL6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC29.83■■■□□ 2.37
Rc3h1Q4VGL6 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC29.83■■■□□ 2.37
Rc3h1Q4VGL6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC29.82■■■□□ 2.36
Rc3h1Q4VGL6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Rc3h1Q4VGL6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
Rc3h1Q4VGL6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC29.79■■■□□ 2.36
Rc3h1Q4VGL6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Rc3h1Q4VGL6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC29.78■■■□□ 2.36
Rc3h1Q4VGL6 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC29.77■■■□□ 2.36
Rc3h1Q4VGL6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Rc3h1Q4VGL6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Rc3h1Q4VGL6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.36
Rc3h1Q4VGL6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Rc3h1Q4VGL6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC29.76■■■□□ 2.35
Rc3h1Q4VGL6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
Rc3h1Q4VGL6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Rc3h1Q4VGL6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
Rc3h1Q4VGL6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC29.72■■■□□ 2.35
Rc3h1Q4VGL6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC29.72■■■□□ 2.35
Rc3h1Q4VGL6 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC29.72■■■□□ 2.35
Rc3h1Q4VGL6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC29.71■■■□□ 2.35
Rc3h1Q4VGL6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
Rc3h1Q4VGL6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
Rc3h1Q4VGL6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Rc3h1Q4VGL6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC29.68■■■□□ 2.34
Rc3h1Q4VGL6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC29.67■■■□□ 2.34
Rc3h1Q4VGL6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC29.67■■■□□ 2.34
Rc3h1Q4VGL6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
Rc3h1Q4VGL6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC29.64■■■□□ 2.34
Rc3h1Q4VGL6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
Rc3h1Q4VGL6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC29.63■■■□□ 2.33
Rc3h1Q4VGL6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC29.62■■■□□ 2.33
Rc3h1Q4VGL6 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC29.6■■■□□ 2.33
Rc3h1Q4VGL6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Rc3h1Q4VGL6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
Rc3h1Q4VGL6 Gm30346-201ENSMUST00000218641 1699 ntBASIC29.58■■■□□ 2.33
Rc3h1Q4VGL6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Rc3h1Q4VGL6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Rc3h1Q4VGL6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC29.56■■■□□ 2.32
Rc3h1Q4VGL6 Gm24970-201ENSMUST00000175582 82 ntBASIC29.56■■■□□ 2.32
Rc3h1Q4VGL6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Rc3h1Q4VGL6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Rc3h1Q4VGL6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Rc3h1Q4VGL6 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Rc3h1Q4VGL6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
Rc3h1Q4VGL6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
Rc3h1Q4VGL6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC29.52■■■□□ 2.32
Rc3h1Q4VGL6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC29.51■■■□□ 2.31
Rc3h1Q4VGL6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC29.51■■■□□ 2.31
Rc3h1Q4VGL6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC29.49■■■□□ 2.31
Rc3h1Q4VGL6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Rc3h1Q4VGL6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Rc3h1Q4VGL6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Rc3h1Q4VGL6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Rc3h1Q4VGL6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC29.47■■■□□ 2.31
Rc3h1Q4VGL6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
Rc3h1Q4VGL6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Rc3h1Q4VGL6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Rc3h1Q4VGL6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
Rc3h1Q4VGL6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Rc3h1Q4VGL6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Rc3h1Q4VGL6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Rc3h1Q4VGL6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Rc3h1Q4VGL6 Gm43863-201ENSMUST00000203822 1192 ntBASIC29.41■■■□□ 2.3
Rc3h1Q4VGL6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC29.4■■■□□ 2.3
Rc3h1Q4VGL6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Rc3h1Q4VGL6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Rc3h1Q4VGL6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Rc3h1Q4VGL6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
Rc3h1Q4VGL6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
Rc3h1Q4VGL6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC29.36■■■□□ 2.29
Rc3h1Q4VGL6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC29.36■■■□□ 2.29
Rc3h1Q4VGL6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Rc3h1Q4VGL6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Rc3h1Q4VGL6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
Rc3h1Q4VGL6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC29.31■■■□□ 2.28
Rc3h1Q4VGL6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Rc3h1Q4VGL6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC29.29■■■□□ 2.28
Rc3h1Q4VGL6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Rc3h1Q4VGL6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC29.28■■■□□ 2.28
Rc3h1Q4VGL6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC29.28■■■□□ 2.28
Rc3h1Q4VGL6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Rc3h1Q4VGL6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
Rc3h1Q4VGL6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
Rc3h1Q4VGL6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC29.24■■■□□ 2.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms