Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Lhx1P63006 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Lhx1P63006 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Lhx1P63006 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Lhx1P63006 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
Lhx1P63006 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Lhx1P63006 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC25.2■■□□□ 1.63
Lhx1P63006 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Lhx1P63006 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Lhx1P63006 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Lhx1P63006 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Lhx1P63006 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Lhx1P63006 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Lhx1P63006 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Lhx1P63006 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Lhx1P63006 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Lhx1P63006 Gm45855-201ENSMUST00000212546 880 ntBASIC25.12■■□□□ 1.61
Lhx1P63006 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Lhx1P63006 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.11■■□□□ 1.61
Lhx1P63006 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Lhx1P63006 Gm9397-201ENSMUST00000200125 605 ntBASIC25.1■■□□□ 1.61
Lhx1P63006 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Lhx1P63006 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.09■■□□□ 1.61
Lhx1P63006 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.08■■□□□ 1.61
Lhx1P63006 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Lhx1P63006 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.07■■□□□ 1.6
Lhx1P63006 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
Lhx1P63006 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Lhx1P63006 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Lhx1P63006 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Lhx1P63006 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Lhx1P63006 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Lhx1P63006 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Lhx1P63006 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Lhx1P63006 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Lhx1P63006 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Lhx1P63006 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Lhx1P63006 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.99■■□□□ 1.59
Lhx1P63006 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Lhx1P63006 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC24.98■■□□□ 1.59
Lhx1P63006 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.97■■□□□ 1.59
Lhx1P63006 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Lhx1P63006 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Lhx1P63006 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.94■■□□□ 1.58
Lhx1P63006 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.94■■□□□ 1.58
Lhx1P63006 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC24.93■■□□□ 1.58
Lhx1P63006 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.93■■□□□ 1.58
Lhx1P63006 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Lhx1P63006 Gm24970-201ENSMUST00000175582 82 ntBASIC24.92■■□□□ 1.58
Lhx1P63006 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Lhx1P63006 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Lhx1P63006 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
Lhx1P63006 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Lhx1P63006 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
Lhx1P63006 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Lhx1P63006 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
Lhx1P63006 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.9■■□□□ 1.58
Lhx1P63006 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.89■■□□□ 1.58
Lhx1P63006 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Lhx1P63006 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Lhx1P63006 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Lhx1P63006 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Lhx1P63006 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Lhx1P63006 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
Lhx1P63006 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Lhx1P63006 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC24.84■■□□□ 1.57
Lhx1P63006 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC24.84■■□□□ 1.57
Lhx1P63006 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Lhx1P63006 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.56
Lhx1P63006 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.81■■□□□ 1.56
Lhx1P63006 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
Lhx1P63006 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Lhx1P63006 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.8■■□□□ 1.56
Lhx1P63006 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Lhx1P63006 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Lhx1P63006 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
Lhx1P63006 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
Lhx1P63006 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Lhx1P63006 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Lhx1P63006 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Lhx1P63006 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Lhx1P63006 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Lhx1P63006 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Lhx1P63006 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
Lhx1P63006 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Lhx1P63006 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.76■■□□□ 1.55
Lhx1P63006 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Lhx1P63006 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Lhx1P63006 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.75■■□□□ 1.55
Lhx1P63006 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Lhx1P63006 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Lhx1P63006 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Lhx1P63006 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Lhx1P63006 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24.71■■□□□ 1.55
Lhx1P63006 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Lhx1P63006 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
Lhx1P63006 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Lhx1P63006 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.69■■□□□ 1.54
Lhx1P63006 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Lhx1P63006 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms