Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pfn1P62962 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pfn1P62962 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pfn1P62962 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pfn1P62962 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pfn1P62962 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.56■□□□□ 0.72
Pfn1P62962 Rab21-202ENSMUST00000218831 843 ntBASIC19.55■□□□□ 0.72
Pfn1P62962 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pfn1P62962 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Pfn1P62962 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pfn1P62962 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pfn1P62962 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pfn1P62962 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pfn1P62962 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pfn1P62962 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pfn1P62962 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pfn1P62962 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pfn1P62962 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.5■□□□□ 0.71
Pfn1P62962 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pfn1P62962 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.5■□□□□ 0.71
Pfn1P62962 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pfn1P62962 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pfn1P62962 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pfn1P62962 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pfn1P62962 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pfn1P62962 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pfn1P62962 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.46■□□□□ 0.71
Pfn1P62962 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Pfn1P62962 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Pfn1P62962 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pfn1P62962 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pfn1P62962 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pfn1P62962 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Pfn1P62962 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pfn1P62962 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.41■□□□□ 0.7
Pfn1P62962 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Pfn1P62962 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pfn1P62962 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.39■□□□□ 0.69
Pfn1P62962 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pfn1P62962 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Pfn1P62962 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pfn1P62962 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Pfn1P62962 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pfn1P62962 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pfn1P62962 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pfn1P62962 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Pfn1P62962 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pfn1P62962 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Pfn1P62962 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pfn1P62962 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Pfn1P62962 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pfn1P62962 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pfn1P62962 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pfn1P62962 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pfn1P62962 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pfn1P62962 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pfn1P62962 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pfn1P62962 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pfn1P62962 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Pfn1P62962 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pfn1P62962 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pfn1P62962 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pfn1P62962 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.28■□□□□ 0.68
Pfn1P62962 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pfn1P62962 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pfn1P62962 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pfn1P62962 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pfn1P62962 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Pfn1P62962 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.25■□□□□ 0.67
Pfn1P62962 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pfn1P62962 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pfn1P62962 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pfn1P62962 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Pfn1P62962 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.24■□□□□ 0.67
Pfn1P62962 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.23■□□□□ 0.67
Pfn1P62962 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pfn1P62962 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pfn1P62962 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pfn1P62962 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pfn1P62962 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pfn1P62962 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pfn1P62962 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pfn1P62962 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pfn1P62962 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pfn1P62962 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Pfn1P62962 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pfn1P62962 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pfn1P62962 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Pfn1P62962 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pfn1P62962 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.18■□□□□ 0.66
Pfn1P62962 Mipep-204ENSMUST00000225043 1548 ntBASIC19.18■□□□□ 0.66
Pfn1P62962 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Pfn1P62962 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Pfn1P62962 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Pfn1P62962 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Pfn1P62962 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pfn1P62962 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pfn1P62962 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pfn1P62962 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.15■□□□□ 0.66
Pfn1P62962 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms