Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
GdnfP48540 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
GdnfP48540 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
GdnfP48540 Amer2-203ENSMUST00000225247 2662 ntBASIC21.88■■□□□ 1.09
GdnfP48540 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
GdnfP48540 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
GdnfP48540 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
GdnfP48540 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
GdnfP48540 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
GdnfP48540 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
GdnfP48540 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
GdnfP48540 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
GdnfP48540 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
GdnfP48540 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
GdnfP48540 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
GdnfP48540 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
GdnfP48540 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
GdnfP48540 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.79■■□□□ 1.08
GdnfP48540 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
GdnfP48540 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GdnfP48540 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GdnfP48540 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
GdnfP48540 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
GdnfP48540 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
GdnfP48540 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GdnfP48540 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GdnfP48540 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
GdnfP48540 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GdnfP48540 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
GdnfP48540 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GdnfP48540 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
GdnfP48540 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.71■■□□□ 1.07
GdnfP48540 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.7■■□□□ 1.07
GdnfP48540 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
GdnfP48540 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.69■■□□□ 1.06
GdnfP48540 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GdnfP48540 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
GdnfP48540 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
GdnfP48540 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GdnfP48540 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
GdnfP48540 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
GdnfP48540 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GdnfP48540 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GdnfP48540 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
GdnfP48540 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GdnfP48540 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GdnfP48540 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GdnfP48540 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.64■■□□□ 1.05
GdnfP48540 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
GdnfP48540 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GdnfP48540 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GdnfP48540 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GdnfP48540 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
GdnfP48540 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GdnfP48540 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
GdnfP48540 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
GdnfP48540 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
GdnfP48540 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.58■■□□□ 1.04
GdnfP48540 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
GdnfP48540 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GdnfP48540 Gm24804-201ENSMUST00000174982 85 ntBASIC21.55■■□□□ 1.04
GdnfP48540 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
GdnfP48540 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
GdnfP48540 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GdnfP48540 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.53■■□□□ 1.04
GdnfP48540 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GdnfP48540 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GdnfP48540 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
GdnfP48540 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GdnfP48540 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.03
GdnfP48540 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
GdnfP48540 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
GdnfP48540 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GdnfP48540 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.5■■□□□ 1.03
GdnfP48540 Peli2-204ENSMUST00000226513 1320 ntBASIC21.5■■□□□ 1.03
GdnfP48540 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.49■■□□□ 1.03
GdnfP48540 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
GdnfP48540 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GdnfP48540 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
GdnfP48540 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GdnfP48540 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
GdnfP48540 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GdnfP48540 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.45■■□□□ 1.02
GdnfP48540 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GdnfP48540 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GdnfP48540 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
GdnfP48540 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
GdnfP48540 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
GdnfP48540 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.44■■□□□ 1.02
GdnfP48540 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
GdnfP48540 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
GdnfP48540 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
GdnfP48540 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
GdnfP48540 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
GdnfP48540 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
GdnfP48540 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GdnfP48540 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.39■■□□□ 1.02
GdnfP48540 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
GdnfP48540 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.39■■□□□ 1.01
GdnfP48540 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms