Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Nedd4P46935 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Nedd4P46935 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Nedd4P46935 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Nedd4P46935 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC31.76■■■□□ 2.67
Nedd4P46935 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Nedd4P46935 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
Nedd4P46935 Gm43863-201ENSMUST00000203822 1192 ntBASIC31.73■■■□□ 2.67
Nedd4P46935 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC31.71■■■□□ 2.67
Nedd4P46935 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Nedd4P46935 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Nedd4P46935 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
Nedd4P46935 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Nedd4P46935 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC31.6■■■□□ 2.65
Nedd4P46935 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
Nedd4P46935 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
Nedd4P46935 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Nedd4P46935 Gm42809-201ENSMUST00000198429 1138 ntBASIC31.58■■■□□ 2.65
Nedd4P46935 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Nedd4P46935 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC31.57■■■□□ 2.64
Nedd4P46935 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC31.55■■■□□ 2.64
Nedd4P46935 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Nedd4P46935 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC31.51■■■□□ 2.63
Nedd4P46935 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC31.51■■■□□ 2.63
Nedd4P46935 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.63
Nedd4P46935 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Nedd4P46935 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC31.5■■■□□ 2.63
Nedd4P46935 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC31.48■■■□□ 2.63
Nedd4P46935 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
Nedd4P46935 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.47■■■□□ 2.63
Nedd4P46935 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Nedd4P46935 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Nedd4P46935 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Nedd4P46935 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Nedd4P46935 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Nedd4P46935 AC157572.2-201ENSMUST00000226970 908 ntBASIC31.43■■■□□ 2.62
Nedd4P46935 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Nedd4P46935 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Nedd4P46935 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
Nedd4P46935 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Nedd4P46935 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.62
Nedd4P46935 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC31.38■■■□□ 2.61
Nedd4P46935 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC31.38■■■□□ 2.61
Nedd4P46935 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Nedd4P46935 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC31.35■■■□□ 2.61
Nedd4P46935 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
Nedd4P46935 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Nedd4P46935 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC31.34■■■□□ 2.61
Nedd4P46935 Gm7432-201ENSMUST00000210343 879 ntBASIC31.33■■■□□ 2.61
Nedd4P46935 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Nedd4P46935 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Nedd4P46935 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Nedd4P46935 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Nedd4P46935 Nkain2-201ENSMUST00000092602 558 ntBASIC31.28■■■□□ 2.6
Nedd4P46935 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC31.27■■■□□ 2.6
Nedd4P46935 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Nedd4P46935 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Nedd4P46935 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Nedd4P46935 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Nedd4P46935 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC31.26■■■□□ 2.59
Nedd4P46935 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC31.25■■■□□ 2.59
Nedd4P46935 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC31.25■■■□□ 2.59
Nedd4P46935 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
Nedd4P46935 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Nedd4P46935 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
Nedd4P46935 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Nedd4P46935 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC31.22■■■□□ 2.59
Nedd4P46935 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Nedd4P46935 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Nedd4P46935 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC31.18■■■□□ 2.58
Nedd4P46935 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Nedd4P46935 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Nedd4P46935 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC31.15■■■□□ 2.58
Nedd4P46935 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC31.15■■■□□ 2.58
Nedd4P46935 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Nedd4P46935 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC31.12■■■□□ 2.57
Nedd4P46935 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Nedd4P46935 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Nedd4P46935 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
Nedd4P46935 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Nedd4P46935 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC31.08■■■□□ 2.57
Nedd4P46935 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC31.08■■■□□ 2.57
Nedd4P46935 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Nedd4P46935 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
Nedd4P46935 Gm11599-201ENSMUST00000118720 878 ntBASIC31.06■■■□□ 2.56
Nedd4P46935 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Nedd4P46935 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC31.06■■■□□ 2.56
Nedd4P46935 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Nedd4P46935 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC31.05■■■□□ 2.56
Nedd4P46935 Mir6538-201ENSMUST00000183713 110 ntBASIC31.05■■■□□ 2.56
Nedd4P46935 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Nedd4P46935 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Nedd4P46935 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Nedd4P46935 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Nedd4P46935 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC31.02■■■□□ 2.56
Nedd4P46935 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Nedd4P46935 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
Nedd4P46935 Gm11175-201ENSMUST00000116172 543 ntBASIC31.01■■■□□ 2.55
Nedd4P46935 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC31.01■■■□□ 2.55
Nedd4P46935 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Retrieved 100 of 76,532 protein–RNA pairs in 124.8 ms