Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
Hist1h1dP43277 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hist1h1dP43277 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hist1h1dP43277 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hist1h1dP43277 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hist1h1dP43277 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hist1h1dP43277 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Hist1h1dP43277 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Hist1h1dP43277 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Hist1h1dP43277 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Hist1h1dP43277 Amer2-203ENSMUST00000225247 2662 ntBASIC21.32■■□□□ 1
Hist1h1dP43277 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.31■■□□□ 1
Hist1h1dP43277 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hist1h1dP43277 Gm27322-201ENSMUST00000184007 104 ntBASIC21.3■■□□□ 1
Hist1h1dP43277 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Hist1h1dP43277 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hist1h1dP43277 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.29■■□□□ 1
Hist1h1dP43277 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Hist1h1dP43277 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hist1h1dP43277 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hist1h1dP43277 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.28■■□□□ 1
Hist1h1dP43277 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.28■■□□□ 1
Hist1h1dP43277 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.28■■□□□ 1
Hist1h1dP43277 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.28■■□□□ 1
Hist1h1dP43277 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hist1h1dP43277 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
Hist1h1dP43277 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Hist1h1dP43277 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
Hist1h1dP43277 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.26■□□□□ 0.99
Hist1h1dP43277 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Hist1h1dP43277 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
Hist1h1dP43277 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.25■□□□□ 0.99
Hist1h1dP43277 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hist1h1dP43277 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Hist1h1dP43277 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Hist1h1dP43277 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hist1h1dP43277 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Hist1h1dP43277 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Hist1h1dP43277 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hist1h1dP43277 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hist1h1dP43277 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.19■□□□□ 0.98
Hist1h1dP43277 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Hist1h1dP43277 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hist1h1dP43277 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hist1h1dP43277 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.17■□□□□ 0.98
Hist1h1dP43277 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hist1h1dP43277 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Hist1h1dP43277 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hist1h1dP43277 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Hist1h1dP43277 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.15■□□□□ 0.98
Hist1h1dP43277 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hist1h1dP43277 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.14■□□□□ 0.98
Hist1h1dP43277 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Hist1h1dP43277 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hist1h1dP43277 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hist1h1dP43277 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hist1h1dP43277 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hist1h1dP43277 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.12■□□□□ 0.97
Hist1h1dP43277 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Hist1h1dP43277 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hist1h1dP43277 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hist1h1dP43277 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.1■□□□□ 0.97
Hist1h1dP43277 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.1■□□□□ 0.97
Hist1h1dP43277 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hist1h1dP43277 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hist1h1dP43277 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hist1h1dP43277 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hist1h1dP43277 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.08■□□□□ 0.97
Hist1h1dP43277 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Hist1h1dP43277 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hist1h1dP43277 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hist1h1dP43277 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hist1h1dP43277 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hist1h1dP43277 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hist1h1dP43277 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hist1h1dP43277 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Hist1h1dP43277 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hist1h1dP43277 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hist1h1dP43277 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Hist1h1dP43277 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.02■□□□□ 0.95
Hist1h1dP43277 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hist1h1dP43277 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21■□□□□ 0.95
Hist1h1dP43277 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21■□□□□ 0.95
Hist1h1dP43277 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Hist1h1dP43277 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hist1h1dP43277 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hist1h1dP43277 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Hist1h1dP43277 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hist1h1dP43277 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Hist1h1dP43277 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Hist1h1dP43277 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hist1h1dP43277 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hist1h1dP43277 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Hist1h1dP43277 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hist1h1dP43277 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hist1h1dP43277 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hist1h1dP43277 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hist1h1dP43277 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Hist1h1dP43277 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hist1h1dP43277 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms