Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cxcl1P12850 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cxcl1P12850 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cxcl1P12850 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cxcl1P12850 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Cxcl1P12850 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cxcl1P12850 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cxcl1P12850 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cxcl1P12850 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cxcl1P12850 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cxcl1P12850 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cxcl1P12850 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.9■□□□□ 0.94
Cxcl1P12850 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Cxcl1P12850 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cxcl1P12850 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cxcl1P12850 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.88■□□□□ 0.93
Cxcl1P12850 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.88■□□□□ 0.93
Cxcl1P12850 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Cxcl1P12850 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cxcl1P12850 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cxcl1P12850 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cxcl1P12850 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cxcl1P12850 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.86■□□□□ 0.93
Cxcl1P12850 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cxcl1P12850 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Cxcl1P12850 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cxcl1P12850 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Cxcl1P12850 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.84■□□□□ 0.93
Cxcl1P12850 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Cxcl1P12850 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Cxcl1P12850 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
Cxcl1P12850 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.81■□□□□ 0.92
Cxcl1P12850 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Cxcl1P12850 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.81■□□□□ 0.92
Cxcl1P12850 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cxcl1P12850 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cxcl1P12850 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cxcl1P12850 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cxcl1P12850 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.78■□□□□ 0.92
Cxcl1P12850 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.77■□□□□ 0.92
Cxcl1P12850 Gm27322-201ENSMUST00000184007 104 ntBASIC20.77■□□□□ 0.92
Cxcl1P12850 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
Cxcl1P12850 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.77■□□□□ 0.92
Cxcl1P12850 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
Cxcl1P12850 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.77■□□□□ 0.91
Cxcl1P12850 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cxcl1P12850 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cxcl1P12850 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cxcl1P12850 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cxcl1P12850 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.75■□□□□ 0.91
Cxcl1P12850 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cxcl1P12850 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cxcl1P12850 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cxcl1P12850 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.73■□□□□ 0.91
Cxcl1P12850 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cxcl1P12850 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cxcl1P12850 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cxcl1P12850 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cxcl1P12850 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Cxcl1P12850 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cxcl1P12850 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Cxcl1P12850 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cxcl1P12850 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.69■□□□□ 0.9
Cxcl1P12850 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cxcl1P12850 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cxcl1P12850 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cxcl1P12850 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cxcl1P12850 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cxcl1P12850 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cxcl1P12850 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cxcl1P12850 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Cxcl1P12850 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cxcl1P12850 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cxcl1P12850 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cxcl1P12850 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.63■□□□□ 0.89
Cxcl1P12850 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cxcl1P12850 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cxcl1P12850 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cxcl1P12850 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cxcl1P12850 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Cxcl1P12850 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cxcl1P12850 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cxcl1P12850 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Cxcl1P12850 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cxcl1P12850 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cxcl1P12850 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cxcl1P12850 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.57■□□□□ 0.88
Cxcl1P12850 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cxcl1P12850 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cxcl1P12850 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Cxcl1P12850 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cxcl1P12850 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cxcl1P12850 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cxcl1P12850 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cxcl1P12850 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cxcl1P12850 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.54■□□□□ 0.88
Cxcl1P12850 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cxcl1P12850 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cxcl1P12850 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cxcl1P12850 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms