Protein–RNA interactions for Protein: P03980

Ig heavy chain V region TEPC 1017, mousemouse

Predictions only

Length 138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P03980 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
P03980 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
P03980 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
P03980 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
P03980 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
P03980 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
P03980 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
P03980 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.43■□□□□ 0.7
P03980 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
P03980 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
P03980 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P03980 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
P03980 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P03980 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
P03980 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
P03980 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.41■□□□□ 0.7
P03980 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
P03980 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P03980 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
P03980 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
P03980 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.39■□□□□ 0.69
P03980 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P03980 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.39■□□□□ 0.69
P03980 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.39■□□□□ 0.69
P03980 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.38■□□□□ 0.69
P03980 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P03980 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
P03980 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.37■□□□□ 0.69
P03980 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
P03980 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
P03980 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P03980 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
P03980 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
P03980 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
P03980 Gm25262-201ENSMUST00000174934 133 ntBASIC19.35■□□□□ 0.69
P03980 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
P03980 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P03980 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.34■□□□□ 0.69
P03980 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P03980 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
P03980 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
P03980 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
P03980 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
P03980 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P03980 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
P03980 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P03980 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P03980 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
P03980 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.3■□□□□ 0.68
P03980 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
P03980 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.29■□□□□ 0.68
P03980 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
P03980 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.29■□□□□ 0.68
P03980 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
P03980 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P03980 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P03980 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
P03980 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P03980 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
P03980 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
P03980 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.26■□□□□ 0.67
P03980 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P03980 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
P03980 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
P03980 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
P03980 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
P03980 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P03980 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P03980 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.24■□□□□ 0.67
P03980 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
P03980 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
P03980 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.23■□□□□ 0.67
P03980 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
P03980 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P03980 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P03980 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
P03980 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
P03980 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
P03980 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
P03980 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
P03980 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.18■□□□□ 0.66
P03980 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
P03980 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P03980 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
P03980 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P03980 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
P03980 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.16■□□□□ 0.66
P03980 Gm27322-201ENSMUST00000184007 104 ntBASIC19.16■□□□□ 0.66
P03980 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
P03980 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P03980 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P03980 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
P03980 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
P03980 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
P03980 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
P03980 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
P03980 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
P03980 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
P03980 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
P03980 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms