Protein–RNA interactions for Protein: P03980

Ig heavy chain V region TEPC 1017, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P03980 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
P03980 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
P03980 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
P03980 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
P03980 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
P03980 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
P03980 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
P03980 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.43■□□□□ 0.7
P03980 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
P03980 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
P03980 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P03980 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
P03980 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P03980 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
P03980 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
P03980 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.41■□□□□ 0.7
P03980 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
P03980 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P03980 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
P03980 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
P03980 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.39■□□□□ 0.69
P03980 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P03980 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.39■□□□□ 0.69
P03980 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.39■□□□□ 0.69
P03980 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.38■□□□□ 0.69
P03980 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P03980 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
P03980 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.37■□□□□ 0.69
P03980 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
P03980 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
P03980 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P03980 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
P03980 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
P03980 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
P03980 Gm25262-201ENSMUST00000174934 133 ntBASIC19.35■□□□□ 0.69
P03980 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
P03980 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P03980 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.34■□□□□ 0.69
P03980 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P03980 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
P03980 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
P03980 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
P03980 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
P03980 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P03980 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
P03980 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P03980 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P03980 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
P03980 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.3■□□□□ 0.68
P03980 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
P03980 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.29■□□□□ 0.68
P03980 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
P03980 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.29■□□□□ 0.68
P03980 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
P03980 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P03980 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P03980 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
P03980 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P03980 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
P03980 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
P03980 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.26■□□□□ 0.67
P03980 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P03980 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
P03980 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
P03980 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
P03980 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
P03980 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P03980 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P03980 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.24■□□□□ 0.67
P03980 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
P03980 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
P03980 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.23■□□□□ 0.67
P03980 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
P03980 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P03980 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P03980 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
P03980 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
P03980 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
P03980 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
P03980 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
P03980 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.18■□□□□ 0.66
P03980 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
P03980 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P03980 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
P03980 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P03980 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
P03980 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.16■□□□□ 0.66
P03980 Gm27322-201ENSMUST00000184007 104 ntBASIC19.16■□□□□ 0.66
P03980 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
P03980 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P03980 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P03980 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
P03980 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
P03980 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
P03980 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
P03980 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
P03980 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
P03980 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
P03980 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
P03980 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms