Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Slc28a2O88627 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Slc28a2O88627 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Slc28a2O88627 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Slc28a2O88627 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
Slc28a2O88627 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Slc28a2O88627 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Slc28a2O88627 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Slc28a2O88627 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Slc28a2O88627 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Slc28a2O88627 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
Slc28a2O88627 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC22.08■■□□□ 1.13
Slc28a2O88627 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.08■■□□□ 1.13
Slc28a2O88627 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
Slc28a2O88627 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Slc28a2O88627 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Slc28a2O88627 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Slc28a2O88627 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Slc28a2O88627 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Slc28a2O88627 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Slc28a2O88627 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Slc28a2O88627 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Slc28a2O88627 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.01■■□□□ 1.11
Slc28a2O88627 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Slc28a2O88627 Peli2-204ENSMUST00000226513 1320 ntBASIC22.01■■□□□ 1.11
Slc28a2O88627 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Slc28a2O88627 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Slc28a2O88627 Gm24804-201ENSMUST00000174982 85 ntBASIC21.99■■□□□ 1.11
Slc28a2O88627 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Slc28a2O88627 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Slc28a2O88627 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Slc28a2O88627 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.98■■□□□ 1.11
Slc28a2O88627 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Slc28a2O88627 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Slc28a2O88627 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.96■■□□□ 1.11
Slc28a2O88627 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Slc28a2O88627 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Slc28a2O88627 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Slc28a2O88627 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Slc28a2O88627 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Slc28a2O88627 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Slc28a2O88627 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Slc28a2O88627 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Slc28a2O88627 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Slc28a2O88627 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Slc28a2O88627 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Slc28a2O88627 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.89■■□□□ 1.09
Slc28a2O88627 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Slc28a2O88627 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.87■■□□□ 1.09
Slc28a2O88627 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
Slc28a2O88627 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Slc28a2O88627 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Slc28a2O88627 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Slc28a2O88627 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Slc28a2O88627 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Slc28a2O88627 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Slc28a2O88627 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Slc28a2O88627 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Slc28a2O88627 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Slc28a2O88627 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Slc28a2O88627 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
Slc28a2O88627 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.83■■□□□ 1.09
Slc28a2O88627 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc28a2O88627 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Slc28a2O88627 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slc28a2O88627 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slc28a2O88627 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
Slc28a2O88627 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.8■■□□□ 1.08
Slc28a2O88627 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slc28a2O88627 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Slc28a2O88627 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Slc28a2O88627 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Slc28a2O88627 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Slc28a2O88627 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Slc28a2O88627 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc28a2O88627 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc28a2O88627 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Slc28a2O88627 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc28a2O88627 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Slc28a2O88627 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Slc28a2O88627 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Slc28a2O88627 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Slc28a2O88627 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc28a2O88627 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Slc28a2O88627 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Slc28a2O88627 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc28a2O88627 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc28a2O88627 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc28a2O88627 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Slc28a2O88627 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc28a2O88627 Gm16148-201ENSMUST00000119653 893 ntBASIC21.73■■□□□ 1.07
Slc28a2O88627 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.73■■□□□ 1.07
Slc28a2O88627 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc28a2O88627 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.72■■□□□ 1.07
Slc28a2O88627 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.71■■□□□ 1.07
Slc28a2O88627 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slc28a2O88627 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.7■■□□□ 1.06
Slc28a2O88627 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Slc28a2O88627 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc28a2O88627 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms