Protein–RNA interactions for Protein: O88574

Sap30, Histone deacetylase complex subunit SAP30, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sap30O88574 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sap30O88574 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sap30O88574 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sap30O88574 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sap30O88574 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sap30O88574 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Sap30O88574 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sap30O88574 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sap30O88574 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sap30O88574 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.28■□□□□ 0.68
Sap30O88574 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sap30O88574 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.26■□□□□ 0.67
Sap30O88574 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sap30O88574 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sap30O88574 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Sap30O88574 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sap30O88574 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.25■□□□□ 0.67
Sap30O88574 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.25■□□□□ 0.67
Sap30O88574 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sap30O88574 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sap30O88574 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.24■□□□□ 0.67
Sap30O88574 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sap30O88574 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sap30O88574 Gm9397-201ENSMUST00000200125 605 ntBASIC19.23■□□□□ 0.67
Sap30O88574 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sap30O88574 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
Sap30O88574 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sap30O88574 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.22■□□□□ 0.67
Sap30O88574 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Sap30O88574 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC19.21■□□□□ 0.67
Sap30O88574 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Sap30O88574 Gm2415-204ENSMUST00000190235 2004 ntBASIC19.2■□□□□ 0.66
Sap30O88574 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Sap30O88574 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.2■□□□□ 0.66
Sap30O88574 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Sap30O88574 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sap30O88574 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sap30O88574 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Sap30O88574 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sap30O88574 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sap30O88574 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sap30O88574 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.18■□□□□ 0.66
Sap30O88574 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sap30O88574 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.17■□□□□ 0.66
Sap30O88574 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sap30O88574 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sap30O88574 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sap30O88574 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Sap30O88574 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.16■□□□□ 0.66
Sap30O88574 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sap30O88574 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sap30O88574 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Sap30O88574 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sap30O88574 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.15■□□□□ 0.66
Sap30O88574 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sap30O88574 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sap30O88574 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Sap30O88574 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sap30O88574 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sap30O88574 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sap30O88574 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sap30O88574 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sap30O88574 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Sap30O88574 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Sap30O88574 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sap30O88574 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.12■□□□□ 0.65
Sap30O88574 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
Sap30O88574 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Sap30O88574 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sap30O88574 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sap30O88574 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.1■□□□□ 0.65
Sap30O88574 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sap30O88574 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sap30O88574 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Sap30O88574 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Sap30O88574 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Sap30O88574 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sap30O88574 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Sap30O88574 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.07■□□□□ 0.64
Sap30O88574 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sap30O88574 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sap30O88574 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sap30O88574 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sap30O88574 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sap30O88574 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sap30O88574 Gm24970-201ENSMUST00000175582 82 ntBASIC19.05■□□□□ 0.64
Sap30O88574 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.05■□□□□ 0.64
Sap30O88574 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sap30O88574 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sap30O88574 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sap30O88574 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sap30O88574 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Sap30O88574 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Sap30O88574 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sap30O88574 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sap30O88574 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sap30O88574 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sap30O88574 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sap30O88574 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.98■□□□□ 0.63
Sap30O88574 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms