Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cldn1O88551 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cldn1O88551 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.79■■□□□ 1.08
Cldn1O88551 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.78■■□□□ 1.08
Cldn1O88551 Gm6821-201ENSMUST00000107540 542 ntBASIC21.78■■□□□ 1.08
Cldn1O88551 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.78■■□□□ 1.08
Cldn1O88551 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cldn1O88551 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cldn1O88551 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Cldn1O88551 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cldn1O88551 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cldn1O88551 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cldn1O88551 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cldn1O88551 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Cldn1O88551 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Cldn1O88551 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cldn1O88551 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cldn1O88551 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cldn1O88551 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cldn1O88551 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cldn1O88551 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.62■■□□□ 1.05
Cldn1O88551 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cldn1O88551 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.6■■□□□ 1.05
Cldn1O88551 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Cldn1O88551 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cldn1O88551 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cldn1O88551 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Cldn1O88551 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cldn1O88551 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cldn1O88551 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cldn1O88551 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cldn1O88551 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cldn1O88551 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.54■■□□□ 1.04
Cldn1O88551 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.53■■□□□ 1.04
Cldn1O88551 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cldn1O88551 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cldn1O88551 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Cldn1O88551 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cldn1O88551 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.5■■□□□ 1.03
Cldn1O88551 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Cldn1O88551 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cldn1O88551 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cldn1O88551 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Cldn1O88551 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.46■■□□□ 1.03
Cldn1O88551 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cldn1O88551 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Cldn1O88551 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cldn1O88551 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.45■■□□□ 1.02
Cldn1O88551 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Cldn1O88551 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cldn1O88551 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Cldn1O88551 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cldn1O88551 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.39■■□□□ 1.01
Cldn1O88551 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.39■■□□□ 1.01
Cldn1O88551 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
Cldn1O88551 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Cldn1O88551 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.38■■□□□ 1.01
Cldn1O88551 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cldn1O88551 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Cldn1O88551 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cldn1O88551 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cldn1O88551 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cldn1O88551 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.36■■□□□ 1.01
Cldn1O88551 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.36■■□□□ 1.01
Cldn1O88551 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cldn1O88551 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
Cldn1O88551 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cldn1O88551 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cldn1O88551 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Cldn1O88551 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Cldn1O88551 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.33■■□□□ 1.01
Cldn1O88551 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.33■■□□□ 1.01
Cldn1O88551 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.33■■□□□ 1
Cldn1O88551 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Cldn1O88551 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cldn1O88551 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cldn1O88551 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Cldn1O88551 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.28■■□□□ 1
Cldn1O88551 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.28■■□□□ 1
Cldn1O88551 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.28■■□□□ 1
Cldn1O88551 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cldn1O88551 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cldn1O88551 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cldn1O88551 Nkain2-201ENSMUST00000092602 558 ntBASIC21.25■□□□□ 0.99
Cldn1O88551 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cldn1O88551 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Cldn1O88551 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cldn1O88551 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Cldn1O88551 Gm7432-201ENSMUST00000210343 879 ntBASIC21.23■□□□□ 0.99
Cldn1O88551 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Cldn1O88551 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cldn1O88551 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cldn1O88551 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Cldn1O88551 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cldn1O88551 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.21■□□□□ 0.99
Cldn1O88551 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Cldn1O88551 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cldn1O88551 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cldn1O88551 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cldn1O88551 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms