Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pdlim3O70209 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Pdlim3O70209 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pdlim3O70209 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pdlim3O70209 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
Pdlim3O70209 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pdlim3O70209 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Pdlim3O70209 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Pdlim3O70209 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Pdlim3O70209 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Pdlim3O70209 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Pdlim3O70209 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Pdlim3O70209 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Pdlim3O70209 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pdlim3O70209 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Pdlim3O70209 AC166822.3-201ENSMUST00000227394 661 ntBASIC22.77■■□□□ 1.24
Pdlim3O70209 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC22.77■■□□□ 1.24
Pdlim3O70209 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pdlim3O70209 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pdlim3O70209 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Pdlim3O70209 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.75■■□□□ 1.23
Pdlim3O70209 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Pdlim3O70209 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Pdlim3O70209 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.74■■□□□ 1.23
Pdlim3O70209 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pdlim3O70209 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pdlim3O70209 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Pdlim3O70209 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.72■■□□□ 1.23
Pdlim3O70209 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Pdlim3O70209 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Pdlim3O70209 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.71■■□□□ 1.23
Pdlim3O70209 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pdlim3O70209 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Pdlim3O70209 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pdlim3O70209 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.69■■□□□ 1.22
Pdlim3O70209 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.68■■□□□ 1.22
Pdlim3O70209 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pdlim3O70209 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.67■■□□□ 1.22
Pdlim3O70209 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.67■■□□□ 1.22
Pdlim3O70209 Gm27322-201ENSMUST00000184007 104 ntBASIC22.66■■□□□ 1.22
Pdlim3O70209 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Pdlim3O70209 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
Pdlim3O70209 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC22.65■■□□□ 1.22
Pdlim3O70209 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.65■■□□□ 1.22
Pdlim3O70209 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pdlim3O70209 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.64■■□□□ 1.22
Pdlim3O70209 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.64■■□□□ 1.22
Pdlim3O70209 Gm17082-201ENSMUST00000166043 1091 ntBASIC22.64■■□□□ 1.21
Pdlim3O70209 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pdlim3O70209 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pdlim3O70209 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pdlim3O70209 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pdlim3O70209 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC22.61■■□□□ 1.21
Pdlim3O70209 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pdlim3O70209 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pdlim3O70209 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pdlim3O70209 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pdlim3O70209 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Pdlim3O70209 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pdlim3O70209 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Pdlim3O70209 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pdlim3O70209 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Pdlim3O70209 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Pdlim3O70209 Gm30346-201ENSMUST00000218641 1699 ntBASIC22.58■■□□□ 1.21
Pdlim3O70209 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pdlim3O70209 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pdlim3O70209 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pdlim3O70209 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pdlim3O70209 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.54■■□□□ 1.2
Pdlim3O70209 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pdlim3O70209 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pdlim3O70209 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pdlim3O70209 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Pdlim3O70209 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pdlim3O70209 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pdlim3O70209 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Pdlim3O70209 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Pdlim3O70209 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pdlim3O70209 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pdlim3O70209 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pdlim3O70209 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pdlim3O70209 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Pdlim3O70209 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pdlim3O70209 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pdlim3O70209 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Pdlim3O70209 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Pdlim3O70209 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.46■■□□□ 1.19
Pdlim3O70209 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
Pdlim3O70209 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pdlim3O70209 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pdlim3O70209 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pdlim3O70209 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pdlim3O70209 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pdlim3O70209 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Pdlim3O70209 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.42■■□□□ 1.18
Pdlim3O70209 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pdlim3O70209 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Pdlim3O70209 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Pdlim3O70209 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.39■■□□□ 1.18
Pdlim3O70209 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms