Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Gm42809-201ENSMUST00000198429 1138 ntBASIC16.94■□□□□ 0.3
Pkd1O08852 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Pkd1O08852 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pkd1O08852 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pkd1O08852 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pkd1O08852 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC16.93■□□□□ 0.3
Pkd1O08852 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pkd1O08852 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pkd1O08852 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pkd1O08852 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pkd1O08852 Gm43863-201ENSMUST00000203822 1192 ntBASIC16.9■□□□□ 0.3
Pkd1O08852 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Pkd1O08852 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Pkd1O08852 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Pkd1O08852 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC16.87■□□□□ 0.29
Pkd1O08852 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC16.87■□□□□ 0.29
Pkd1O08852 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pkd1O08852 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pkd1O08852 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pkd1O08852 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pkd1O08852 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pkd1O08852 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC16.83■□□□□ 0.28
Pkd1O08852 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC16.83■□□□□ 0.28
Pkd1O08852 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pkd1O08852 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.82■□□□□ 0.28
Pkd1O08852 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pkd1O08852 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Pkd1O08852 AC157572.2-201ENSMUST00000226970 908 ntBASIC16.82■□□□□ 0.28
Pkd1O08852 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pkd1O08852 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pkd1O08852 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC16.81■□□□□ 0.28
Pkd1O08852 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pkd1O08852 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pkd1O08852 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pkd1O08852 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC16.78■□□□□ 0.28
Pkd1O08852 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
Pkd1O08852 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC16.78■□□□□ 0.28
Pkd1O08852 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pkd1O08852 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pkd1O08852 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
Pkd1O08852 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pkd1O08852 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC16.74■□□□□ 0.27
Pkd1O08852 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pkd1O08852 Gm11175-201ENSMUST00000116172 543 ntBASIC16.73■□□□□ 0.27
Pkd1O08852 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pkd1O08852 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Pkd1O08852 Gm7432-201ENSMUST00000210343 879 ntBASIC16.72■□□□□ 0.27
Pkd1O08852 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pkd1O08852 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Pkd1O08852 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Pkd1O08852 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pkd1O08852 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pkd1O08852 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.69■□□□□ 0.26
Pkd1O08852 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pkd1O08852 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pkd1O08852 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pkd1O08852 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pkd1O08852 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC16.68■□□□□ 0.26
Pkd1O08852 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pkd1O08852 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
Pkd1O08852 Mir6538-201ENSMUST00000183713 110 ntBASIC16.66■□□□□ 0.26
Pkd1O08852 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pkd1O08852 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pkd1O08852 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pkd1O08852 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pkd1O08852 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pkd1O08852 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pkd1O08852 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pkd1O08852 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pkd1O08852 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pkd1O08852 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC16.64■□□□□ 0.25
Pkd1O08852 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pkd1O08852 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pkd1O08852 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pkd1O08852 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pkd1O08852 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pkd1O08852 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pkd1O08852 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC16.59■□□□□ 0.25
Pkd1O08852 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Pkd1O08852 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pkd1O08852 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pkd1O08852 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pkd1O08852 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pkd1O08852 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Pkd1O08852 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pkd1O08852 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC16.57■□□□□ 0.24
Pkd1O08852 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Pkd1O08852 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pkd1O08852 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pkd1O08852 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pkd1O08852 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Pkd1O08852 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pkd1O08852 Nkain2-201ENSMUST00000092602 558 ntBASIC16.55■□□□□ 0.24
Pkd1O08852 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC16.55■□□□□ 0.24
Pkd1O08852 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Pkd1O08852 Gm11599-201ENSMUST00000118720 878 ntBASIC16.54■□□□□ 0.24
Pkd1O08852 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pkd1O08852 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pkd1O08852 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pkd1O08852 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms