Protein–RNA interactions for Protein: O08843

Lst1, Leukocyte-specific transcript 1 protein, mousemouse

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lst1O08843 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC16.92■□□□□ 0.3
Lst1O08843 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lst1O08843 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Lst1O08843 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lst1O08843 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lst1O08843 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Lst1O08843 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lst1O08843 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Lst1O08843 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lst1O08843 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lst1O08843 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Lst1O08843 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lst1O08843 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lst1O08843 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lst1O08843 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lst1O08843 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lst1O08843 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lst1O08843 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC16.86■□□□□ 0.29
Lst1O08843 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Lst1O08843 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Lst1O08843 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lst1O08843 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lst1O08843 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Lst1O08843 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lst1O08843 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lst1O08843 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lst1O08843 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lst1O08843 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC16.8■□□□□ 0.28
Lst1O08843 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lst1O08843 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Lst1O08843 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lst1O08843 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lst1O08843 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lst1O08843 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lst1O08843 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lst1O08843 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Lst1O08843 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Lst1O08843 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lst1O08843 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lst1O08843 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lst1O08843 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lst1O08843 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Lst1O08843 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC16.76■□□□□ 0.27
Lst1O08843 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lst1O08843 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC16.75■□□□□ 0.27
Lst1O08843 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lst1O08843 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lst1O08843 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC16.73■□□□□ 0.27
Lst1O08843 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lst1O08843 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lst1O08843 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lst1O08843 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lst1O08843 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Lst1O08843 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lst1O08843 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lst1O08843 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lst1O08843 AC153890.1-201ENSMUST00000220021 2469 ntBASIC16.69■□□□□ 0.26
Lst1O08843 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Lst1O08843 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Lst1O08843 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.69■□□□□ 0.26
Lst1O08843 Gm6345-201ENSMUST00000180378 1691 ntBASIC16.69■□□□□ 0.26
Lst1O08843 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Lst1O08843 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Lst1O08843 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Lst1O08843 Mipep-204ENSMUST00000225043 1548 ntBASIC16.67■□□□□ 0.26
Lst1O08843 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lst1O08843 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lst1O08843 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lst1O08843 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC16.67■□□□□ 0.26
Lst1O08843 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lst1O08843 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lst1O08843 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lst1O08843 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC16.65■□□□□ 0.26
Lst1O08843 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lst1O08843 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lst1O08843 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lst1O08843 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lst1O08843 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Lst1O08843 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Lst1O08843 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC16.61■□□□□ 0.25
Lst1O08843 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Lst1O08843 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lst1O08843 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lst1O08843 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC16.6■□□□□ 0.25
Lst1O08843 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lst1O08843 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lst1O08843 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lst1O08843 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Lst1O08843 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lst1O08843 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC16.59■□□□□ 0.25
Lst1O08843 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lst1O08843 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lst1O08843 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Lst1O08843 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Lst1O08843 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Lst1O08843 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lst1O08843 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lst1O08843 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lst1O08843 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lst1O08843 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms