Protein–RNA interactions for Protein: J3KMS6

Gm21818, MCG122238, isoform CRA_a, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21818J3KMS6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Gm21818J3KMS6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
Gm21818J3KMS6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Gm21818J3KMS6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Gm21818J3KMS6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Gm21818J3KMS6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm21818J3KMS6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.38■■□□□ 1.01
Gm21818J3KMS6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gm21818J3KMS6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Gm21818J3KMS6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Gm21818J3KMS6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
Gm21818J3KMS6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.33■■□□□ 1
Gm21818J3KMS6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm21818J3KMS6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.32■■□□□ 1
Gm21818J3KMS6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Gm21818J3KMS6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gm21818J3KMS6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Gm21818J3KMS6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm21818J3KMS6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm21818J3KMS6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm21818J3KMS6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm21818J3KMS6 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Gm21818J3KMS6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm21818J3KMS6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Gm21818J3KMS6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm21818J3KMS6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Gm21818J3KMS6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Gm21818J3KMS6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Gm21818J3KMS6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm21818J3KMS6 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.21■□□□□ 0.99
Gm21818J3KMS6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm21818J3KMS6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Gm21818J3KMS6 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Gm21818J3KMS6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Gm21818J3KMS6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm21818J3KMS6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm21818J3KMS6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm21818J3KMS6 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm21818J3KMS6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Gm21818J3KMS6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Gm21818J3KMS6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.17■□□□□ 0.98
Gm21818J3KMS6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Gm21818J3KMS6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm21818J3KMS6 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Gm21818J3KMS6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm21818J3KMS6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm21818J3KMS6 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.15■□□□□ 0.98
Gm21818J3KMS6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm21818J3KMS6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.15■□□□□ 0.98
Gm21818J3KMS6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Gm21818J3KMS6 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.14■□□□□ 0.98
Gm21818J3KMS6 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Gm21818J3KMS6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm21818J3KMS6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Gm21818J3KMS6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Gm21818J3KMS6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm21818J3KMS6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm21818J3KMS6 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.11■□□□□ 0.97
Gm21818J3KMS6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm21818J3KMS6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Gm21818J3KMS6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Gm21818J3KMS6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Gm21818J3KMS6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Gm21818J3KMS6 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm21818J3KMS6 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.09■□□□□ 0.97
Gm21818J3KMS6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm21818J3KMS6 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.08■□□□□ 0.97
Gm21818J3KMS6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gm21818J3KMS6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Gm21818J3KMS6 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Gm21818J3KMS6 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.06■□□□□ 0.96
Gm21818J3KMS6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm21818J3KMS6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.04■□□□□ 0.96
Gm21818J3KMS6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.04■□□□□ 0.96
Gm21818J3KMS6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm21818J3KMS6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm21818J3KMS6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
Gm21818J3KMS6 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Gm21818J3KMS6 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm21818J3KMS6 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Gm21818J3KMS6 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Gm21818J3KMS6 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm21818J3KMS6 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm21818J3KMS6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm21818J3KMS6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm21818J3KMS6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Gm21818J3KMS6 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Gm21818J3KMS6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Gm21818J3KMS6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Gm21818J3KMS6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Gm21818J3KMS6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm21818J3KMS6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm21818J3KMS6 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm21818J3KMS6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
Gm21818J3KMS6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm21818J3KMS6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm21818J3KMS6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Gm21818J3KMS6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm21818J3KMS6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.98■□□□□ 0.95
Gm21818J3KMS6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 9.4 ms