Protein–RNA interactions for Protein: F6XDR3

Gm10542, Predicted gene 10542, mousemouse

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10542F6XDR3 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Gm10542F6XDR3 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm10542F6XDR3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Gm10542F6XDR3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Gm10542F6XDR3 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Gm10542F6XDR3 Gm25262-201ENSMUST00000174934 133 ntBASIC17.35■□□□□ 0.37
Gm10542F6XDR3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm10542F6XDR3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm10542F6XDR3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm10542F6XDR3 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm10542F6XDR3 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm10542F6XDR3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm10542F6XDR3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm10542F6XDR3 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm10542F6XDR3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC17.31■□□□□ 0.36
Gm10542F6XDR3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm10542F6XDR3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Gm10542F6XDR3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm10542F6XDR3 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Gm10542F6XDR3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm10542F6XDR3 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm10542F6XDR3 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm10542F6XDR3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm10542F6XDR3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Gm10542F6XDR3 Gm6345-201ENSMUST00000180378 1691 ntBASIC17.27■□□□□ 0.36
Gm10542F6XDR3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm10542F6XDR3 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Gm10542F6XDR3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm10542F6XDR3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm10542F6XDR3 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm10542F6XDR3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC17.25■□□□□ 0.35
Gm10542F6XDR3 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm10542F6XDR3 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm10542F6XDR3 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Gm10542F6XDR3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm10542F6XDR3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm10542F6XDR3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm10542F6XDR3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC17.23■□□□□ 0.35
Gm10542F6XDR3 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm10542F6XDR3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm10542F6XDR3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC17.22■□□□□ 0.35
Gm10542F6XDR3 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm10542F6XDR3 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Gm10542F6XDR3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm10542F6XDR3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm10542F6XDR3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Gm10542F6XDR3 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm10542F6XDR3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Gm10542F6XDR3 AC166822.3-201ENSMUST00000227394 661 ntBASIC17.2■□□□□ 0.34
Gm10542F6XDR3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC17.2■□□□□ 0.34
Gm10542F6XDR3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm10542F6XDR3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC17.19■□□□□ 0.34
Gm10542F6XDR3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm10542F6XDR3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm10542F6XDR3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC17.18■□□□□ 0.34
Gm10542F6XDR3 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC17.17■□□□□ 0.34
Gm10542F6XDR3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm10542F6XDR3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm10542F6XDR3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gm10542F6XDR3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm10542F6XDR3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm10542F6XDR3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm10542F6XDR3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm10542F6XDR3 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC17.16■□□□□ 0.34
Gm10542F6XDR3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Gm10542F6XDR3 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC17.15■□□□□ 0.34
Gm10542F6XDR3 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Gm10542F6XDR3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Gm10542F6XDR3 Fezf2-202ENSMUST00000224023 1917 ntBASIC17.14■□□□□ 0.33
Gm10542F6XDR3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm10542F6XDR3 Gm27322-201ENSMUST00000184007 104 ntBASIC17.14■□□□□ 0.33
Gm10542F6XDR3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm10542F6XDR3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm10542F6XDR3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm10542F6XDR3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm10542F6XDR3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Gm10542F6XDR3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm10542F6XDR3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm10542F6XDR3 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm10542F6XDR3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm10542F6XDR3 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm10542F6XDR3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm10542F6XDR3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm10542F6XDR3 Gm17082-201ENSMUST00000166043 1091 ntBASIC17.11■□□□□ 0.33
Gm10542F6XDR3 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm10542F6XDR3 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
Gm10542F6XDR3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm10542F6XDR3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm10542F6XDR3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
Gm10542F6XDR3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm10542F6XDR3 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm10542F6XDR3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Gm10542F6XDR3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm10542F6XDR3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm10542F6XDR3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC17.06■□□□□ 0.32
Gm10542F6XDR3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm10542F6XDR3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gm10542F6XDR3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm10542F6XDR3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm10542F6XDR3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms