Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Shank1D3YZU1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.24■■□□□ 1.31
Shank1D3YZU1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
Shank1D3YZU1 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Shank1D3YZU1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.2■■□□□ 1.3
Shank1D3YZU1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
Shank1D3YZU1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Shank1D3YZU1 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Shank1D3YZU1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Shank1D3YZU1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Shank1D3YZU1 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.17■■□□□ 1.3
Shank1D3YZU1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Shank1D3YZU1 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Shank1D3YZU1 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Shank1D3YZU1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Shank1D3YZU1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Shank1D3YZU1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Shank1D3YZU1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Shank1D3YZU1 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Shank1D3YZU1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Shank1D3YZU1 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.11■■□□□ 1.29
Shank1D3YZU1 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.11■■□□□ 1.29
Shank1D3YZU1 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
Shank1D3YZU1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Shank1D3YZU1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.28
Shank1D3YZU1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Shank1D3YZU1 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.07■■□□□ 1.28
Shank1D3YZU1 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Shank1D3YZU1 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Shank1D3YZU1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Shank1D3YZU1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Shank1D3YZU1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Shank1D3YZU1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Shank1D3YZU1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.01■■□□□ 1.27
Shank1D3YZU1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23■■□□□ 1.27
Shank1D3YZU1 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.99■■□□□ 1.27
Shank1D3YZU1 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Shank1D3YZU1 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Shank1D3YZU1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Shank1D3YZU1 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.96■■□□□ 1.27
Shank1D3YZU1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Shank1D3YZU1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Shank1D3YZU1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Shank1D3YZU1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Shank1D3YZU1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.9■■□□□ 1.26
Shank1D3YZU1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Shank1D3YZU1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Shank1D3YZU1 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Shank1D3YZU1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.87■■□□□ 1.25
Shank1D3YZU1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Shank1D3YZU1 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Shank1D3YZU1 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Shank1D3YZU1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.84■■□□□ 1.25
Shank1D3YZU1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.83■■□□□ 1.25
Shank1D3YZU1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Shank1D3YZU1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Shank1D3YZU1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Shank1D3YZU1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.82■■□□□ 1.24
Shank1D3YZU1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
Shank1D3YZU1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Shank1D3YZU1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Shank1D3YZU1 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Shank1D3YZU1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Shank1D3YZU1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC22.77■■□□□ 1.24
Shank1D3YZU1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Shank1D3YZU1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Shank1D3YZU1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.75■■□□□ 1.23
Shank1D3YZU1 Gm7432-201ENSMUST00000210343 879 ntBASIC22.75■■□□□ 1.23
Shank1D3YZU1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Shank1D3YZU1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Shank1D3YZU1 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22.74■■□□□ 1.23
Shank1D3YZU1 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Shank1D3YZU1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.74■■□□□ 1.23
Shank1D3YZU1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Shank1D3YZU1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Shank1D3YZU1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Shank1D3YZU1 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.73■■□□□ 1.23
Shank1D3YZU1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Shank1D3YZU1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
Shank1D3YZU1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Shank1D3YZU1 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Shank1D3YZU1 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Shank1D3YZU1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Shank1D3YZU1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC22.7■■□□□ 1.22
Shank1D3YZU1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.7■■□□□ 1.22
Shank1D3YZU1 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
Shank1D3YZU1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Shank1D3YZU1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Shank1D3YZU1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Shank1D3YZU1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Shank1D3YZU1 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Shank1D3YZU1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Shank1D3YZU1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Shank1D3YZU1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Shank1D3YZU1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.65■■□□□ 1.22
Shank1D3YZU1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Shank1D3YZU1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Shank1D3YZU1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Shank1D3YZU1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Shank1D3YZU1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.63■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms