Protein–RNA interactions for Protein: D3YV89

Mmp27, Matrix metalloproteinase, mousemouse

Predictions only

Length 551 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp27D3YV89 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Mmp27D3YV89 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mmp27D3YV89 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Mmp27D3YV89 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mmp27D3YV89 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Mmp27D3YV89 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Mmp27D3YV89 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mmp27D3YV89 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mmp27D3YV89 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.95■□□□□ 0.94
Mmp27D3YV89 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mmp27D3YV89 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mmp27D3YV89 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Mmp27D3YV89 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mmp27D3YV89 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mmp27D3YV89 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Mmp27D3YV89 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Mmp27D3YV89 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mmp27D3YV89 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.9■□□□□ 0.94
Mmp27D3YV89 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mmp27D3YV89 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Mmp27D3YV89 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Mmp27D3YV89 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Mmp27D3YV89 Gm24804-201ENSMUST00000174982 85 ntBASIC20.88■□□□□ 0.93
Mmp27D3YV89 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Mmp27D3YV89 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Mmp27D3YV89 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Mmp27D3YV89 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Mmp27D3YV89 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mmp27D3YV89 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.86■□□□□ 0.93
Mmp27D3YV89 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Mmp27D3YV89 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Mmp27D3YV89 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Mmp27D3YV89 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.83■□□□□ 0.93
Mmp27D3YV89 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Mmp27D3YV89 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Mmp27D3YV89 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Mmp27D3YV89 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mmp27D3YV89 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp27D3YV89 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp27D3YV89 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mmp27D3YV89 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.8■□□□□ 0.92
Mmp27D3YV89 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.79■□□□□ 0.92
Mmp27D3YV89 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Mmp27D3YV89 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Mmp27D3YV89 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mmp27D3YV89 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mmp27D3YV89 Amer2-203ENSMUST00000225247 2662 ntBASIC20.78■□□□□ 0.92
Mmp27D3YV89 Mipep-204ENSMUST00000225043 1548 ntBASIC20.78■□□□□ 0.92
Mmp27D3YV89 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Mmp27D3YV89 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp27D3YV89 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp27D3YV89 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.75■□□□□ 0.91
Mmp27D3YV89 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp27D3YV89 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mmp27D3YV89 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mmp27D3YV89 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mmp27D3YV89 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mmp27D3YV89 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mmp27D3YV89 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.71■□□□□ 0.91
Mmp27D3YV89 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Mmp27D3YV89 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Mmp27D3YV89 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mmp27D3YV89 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Mmp27D3YV89 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Mmp27D3YV89 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mmp27D3YV89 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Mmp27D3YV89 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.68■□□□□ 0.9
Mmp27D3YV89 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Mmp27D3YV89 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mmp27D3YV89 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp27D3YV89 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp27D3YV89 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp27D3YV89 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp27D3YV89 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp27D3YV89 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp27D3YV89 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp27D3YV89 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Mmp27D3YV89 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp27D3YV89 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp27D3YV89 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Mmp27D3YV89 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Mmp27D3YV89 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mmp27D3YV89 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Mmp27D3YV89 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Mmp27D3YV89 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp27D3YV89 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp27D3YV89 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Mmp27D3YV89 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp27D3YV89 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp27D3YV89 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp27D3YV89 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.57■□□□□ 0.88
Mmp27D3YV89 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp27D3YV89 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Mmp27D3YV89 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.54■□□□□ 0.88
Mmp27D3YV89 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp27D3YV89 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp27D3YV89 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp27D3YV89 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp27D3YV89 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp27D3YV89 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms