Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Gm11127A7VMS2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Gm11127A7VMS2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Gm11127A7VMS2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Gm11127A7VMS2 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.12■■□□□ 1.13
Gm11127A7VMS2 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Gm11127A7VMS2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC22.1■■□□□ 1.13
Gm11127A7VMS2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Gm11127A7VMS2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Gm11127A7VMS2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Gm11127A7VMS2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Gm11127A7VMS2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Gm11127A7VMS2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC22.08■■□□□ 1.13
Gm11127A7VMS2 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Gm11127A7VMS2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm11127A7VMS2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm11127A7VMS2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22.07■■□□□ 1.12
Gm11127A7VMS2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Gm11127A7VMS2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Gm11127A7VMS2 Gm17082-201ENSMUST00000166043 1091 ntBASIC22.06■■□□□ 1.12
Gm11127A7VMS2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Gm11127A7VMS2 Gm27322-201ENSMUST00000184007 104 ntBASIC22.05■■□□□ 1.12
Gm11127A7VMS2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Gm11127A7VMS2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Gm11127A7VMS2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Gm11127A7VMS2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm11127A7VMS2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.03■■□□□ 1.12
Gm11127A7VMS2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm11127A7VMS2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm11127A7VMS2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm11127A7VMS2 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Gm11127A7VMS2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Gm11127A7VMS2 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Gm11127A7VMS2 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Gm11127A7VMS2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm11127A7VMS2 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gm11127A7VMS2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.97■■□□□ 1.11
Gm11127A7VMS2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Gm11127A7VMS2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.96■■□□□ 1.11
Gm11127A7VMS2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Gm11127A7VMS2 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Gm11127A7VMS2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.94■■□□□ 1.1
Gm11127A7VMS2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Gm11127A7VMS2 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.93■■□□□ 1.1
Gm11127A7VMS2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Gm11127A7VMS2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Gm11127A7VMS2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Gm11127A7VMS2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.91■■□□□ 1.1
Gm11127A7VMS2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Gm11127A7VMS2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Gm11127A7VMS2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Gm11127A7VMS2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
Gm11127A7VMS2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Gm11127A7VMS2 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Gm11127A7VMS2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Gm11127A7VMS2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
Gm11127A7VMS2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Gm11127A7VMS2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.85■■□□□ 1.09
Gm11127A7VMS2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Gm11127A7VMS2 Gm26115-201ENSMUST00000175605 87 ntBASIC21.83■■□□□ 1.09
Gm11127A7VMS2 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gm11127A7VMS2 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gm11127A7VMS2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Gm11127A7VMS2 Gm8109-201ENSMUST00000194076 746 ntBASIC21.81■■□□□ 1.08
Gm11127A7VMS2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Gm11127A7VMS2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.8■■□□□ 1.08
Gm11127A7VMS2 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Gm11127A7VMS2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm11127A7VMS2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Gm11127A7VMS2 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm11127A7VMS2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
Gm11127A7VMS2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Gm11127A7VMS2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gm11127A7VMS2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gm11127A7VMS2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Gm11127A7VMS2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Gm11127A7VMS2 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Gm11127A7VMS2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Gm11127A7VMS2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Gm11127A7VMS2 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm11127A7VMS2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Gm11127A7VMS2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Gm11127A7VMS2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gm11127A7VMS2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gm11127A7VMS2 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gm11127A7VMS2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gm11127A7VMS2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gm11127A7VMS2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Gm11127A7VMS2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gm11127A7VMS2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gm11127A7VMS2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm11127A7VMS2 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Gm11127A7VMS2 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm11127A7VMS2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm11127A7VMS2 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm11127A7VMS2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Gm11127A7VMS2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Gm11127A7VMS2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Gm11127A7VMS2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Gm11127A7VMS2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms