Protein–RNA interactions for Protein: A2BED8

Samt1, Predicted gene 10057, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samt1A2BED8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Samt1A2BED8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Samt1A2BED8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Samt1A2BED8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Samt1A2BED8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Samt1A2BED8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Samt1A2BED8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Samt1A2BED8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.1■□□□□ 0.81
Samt1A2BED8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Samt1A2BED8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Samt1A2BED8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Samt1A2BED8 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Samt1A2BED8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Samt1A2BED8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Samt1A2BED8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Samt1A2BED8 Amer2-203ENSMUST00000225247 2662 ntBASIC20.07■□□□□ 0.8
Samt1A2BED8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Samt1A2BED8 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Samt1A2BED8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Samt1A2BED8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Samt1A2BED8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.04■□□□□ 0.8
Samt1A2BED8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.03■□□□□ 0.8
Samt1A2BED8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.03■□□□□ 0.8
Samt1A2BED8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Samt1A2BED8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.02■□□□□ 0.8
Samt1A2BED8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.01■□□□□ 0.79
Samt1A2BED8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Samt1A2BED8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Samt1A2BED8 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.98■□□□□ 0.79
Samt1A2BED8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Samt1A2BED8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Samt1A2BED8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Samt1A2BED8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Samt1A2BED8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Samt1A2BED8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Samt1A2BED8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Samt1A2BED8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Samt1A2BED8 Gm27322-201ENSMUST00000184007 104 ntBASIC19.95■□□□□ 0.78
Samt1A2BED8 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Samt1A2BED8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Samt1A2BED8 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.93■□□□□ 0.78
Samt1A2BED8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Samt1A2BED8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Samt1A2BED8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.92■□□□□ 0.78
Samt1A2BED8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Samt1A2BED8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Samt1A2BED8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Samt1A2BED8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Samt1A2BED8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Samt1A2BED8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Samt1A2BED8 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Samt1A2BED8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Samt1A2BED8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.9■□□□□ 0.78
Samt1A2BED8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Samt1A2BED8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.89■□□□□ 0.77
Samt1A2BED8 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.89■□□□□ 0.77
Samt1A2BED8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Samt1A2BED8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Samt1A2BED8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Samt1A2BED8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Samt1A2BED8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Samt1A2BED8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Samt1A2BED8 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Samt1A2BED8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
Samt1A2BED8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Samt1A2BED8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.85■□□□□ 0.77
Samt1A2BED8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Samt1A2BED8 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Samt1A2BED8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Samt1A2BED8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Samt1A2BED8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Samt1A2BED8 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Samt1A2BED8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Samt1A2BED8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Samt1A2BED8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Samt1A2BED8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Samt1A2BED8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Samt1A2BED8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Samt1A2BED8 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Samt1A2BED8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Samt1A2BED8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Samt1A2BED8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Samt1A2BED8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Samt1A2BED8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Samt1A2BED8 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Samt1A2BED8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Samt1A2BED8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Samt1A2BED8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Samt1A2BED8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Samt1A2BED8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Samt1A2BED8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Samt1A2BED8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Samt1A2BED8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Samt1A2BED8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Samt1A2BED8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Samt1A2BED8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Samt1A2BED8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Samt1A2BED8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Samt1A2BED8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Samt1A2BED8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms