Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Smim17A0A504 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Smim17A0A504 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Smim17A0A504 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Smim17A0A504 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Smim17A0A504 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Smim17A0A504 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
Smim17A0A504 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC22.81■■□□□ 1.24
Smim17A0A504 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Smim17A0A504 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Smim17A0A504 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Smim17A0A504 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.77■■□□□ 1.24
Smim17A0A504 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Smim17A0A504 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Smim17A0A504 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Smim17A0A504 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Smim17A0A504 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Smim17A0A504 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Smim17A0A504 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Smim17A0A504 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Smim17A0A504 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Smim17A0A504 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Smim17A0A504 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Smim17A0A504 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Smim17A0A504 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22.69■■□□□ 1.22
Smim17A0A504 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Smim17A0A504 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Smim17A0A504 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22.68■■□□□ 1.22
Smim17A0A504 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Smim17A0A504 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Smim17A0A504 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Smim17A0A504 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.66■■□□□ 1.22
Smim17A0A504 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Smim17A0A504 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Smim17A0A504 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Smim17A0A504 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Smim17A0A504 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Smim17A0A504 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Smim17A0A504 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
Smim17A0A504 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Smim17A0A504 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Smim17A0A504 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.62■■□□□ 1.21
Smim17A0A504 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.61■■□□□ 1.21
Smim17A0A504 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Smim17A0A504 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Smim17A0A504 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Smim17A0A504 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Smim17A0A504 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Smim17A0A504 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
Smim17A0A504 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Smim17A0A504 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Smim17A0A504 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Smim17A0A504 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.56■■□□□ 1.2
Smim17A0A504 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Smim17A0A504 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.56■■□□□ 1.2
Smim17A0A504 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Smim17A0A504 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Smim17A0A504 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Smim17A0A504 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Smim17A0A504 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Smim17A0A504 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Smim17A0A504 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Smim17A0A504 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Smim17A0A504 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Smim17A0A504 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Smim17A0A504 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Smim17A0A504 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Smim17A0A504 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22.49■■□□□ 1.19
Smim17A0A504 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Smim17A0A504 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Smim17A0A504 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Smim17A0A504 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Smim17A0A504 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
Smim17A0A504 Gm25238-201ENSMUST00000174914 89 ntBASIC22.45■■□□□ 1.18
Smim17A0A504 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22.44■■□□□ 1.18
Smim17A0A504 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Smim17A0A504 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.43■■□□□ 1.18
Smim17A0A504 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22.42■■□□□ 1.18
Smim17A0A504 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Smim17A0A504 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.42■■□□□ 1.18
Smim17A0A504 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Smim17A0A504 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Smim17A0A504 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Smim17A0A504 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Smim17A0A504 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Smim17A0A504 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Smim17A0A504 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Smim17A0A504 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Smim17A0A504 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Smim17A0A504 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Smim17A0A504 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Smim17A0A504 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Smim17A0A504 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Smim17A0A504 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Smim17A0A504 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Smim17A0A504 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
Smim17A0A504 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.33■■□□□ 1.16
Smim17A0A504 Mipep-204ENSMUST00000225043 1548 ntBASIC22.32■■□□□ 1.16
Smim17A0A504 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Smim17A0A504 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms