Protein–RNA interactions for Protein: A0A140T8M7

Rpl23a-ps3, Ribosomal protein L23A, pseudogene 3, mousemouse

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl23a-ps3A0A140T8M7 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Rpl23a-ps3A0A140T8M7 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rpl23a-ps3A0A140T8M7 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rpl23a-ps3A0A140T8M7 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rpl23a-ps3A0A140T8M7 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.89■□□□□ 0.93
Rpl23a-ps3A0A140T8M7 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpl23a-ps3A0A140T8M7 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpl23a-ps3A0A140T8M7 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpl23a-ps3A0A140T8M7 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpl23a-ps3A0A140T8M7 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.87■□□□□ 0.93
Rpl23a-ps3A0A140T8M7 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rpl23a-ps3A0A140T8M7 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rpl23a-ps3A0A140T8M7 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rpl23a-ps3A0A140T8M7 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rpl23a-ps3A0A140T8M7 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rpl23a-ps3A0A140T8M7 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rpl23a-ps3A0A140T8M7 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpl23a-ps3A0A140T8M7 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rpl23a-ps3A0A140T8M7 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rpl23a-ps3A0A140T8M7 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
Rpl23a-ps3A0A140T8M7 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rpl23a-ps3A0A140T8M7 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.8■□□□□ 0.92
Rpl23a-ps3A0A140T8M7 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rpl23a-ps3A0A140T8M7 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rpl23a-ps3A0A140T8M7 Mipep-204ENSMUST00000225043 1548 ntBASIC20.78■□□□□ 0.92
Rpl23a-ps3A0A140T8M7 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rpl23a-ps3A0A140T8M7 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Rpl23a-ps3A0A140T8M7 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Rpl23a-ps3A0A140T8M7 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rpl23a-ps3A0A140T8M7 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.76■□□□□ 0.91
Rpl23a-ps3A0A140T8M7 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rpl23a-ps3A0A140T8M7 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rpl23a-ps3A0A140T8M7 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rpl23a-ps3A0A140T8M7 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rpl23a-ps3A0A140T8M7 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rpl23a-ps3A0A140T8M7 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpl23a-ps3A0A140T8M7 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpl23a-ps3A0A140T8M7 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rpl23a-ps3A0A140T8M7 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpl23a-ps3A0A140T8M7 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rpl23a-ps3A0A140T8M7 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpl23a-ps3A0A140T8M7 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpl23a-ps3A0A140T8M7 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rpl23a-ps3A0A140T8M7 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpl23a-ps3A0A140T8M7 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rpl23a-ps3A0A140T8M7 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.65■□□□□ 0.9
Rpl23a-ps3A0A140T8M7 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rpl23a-ps3A0A140T8M7 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Rpl23a-ps3A0A140T8M7 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpl23a-ps3A0A140T8M7 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpl23a-ps3A0A140T8M7 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rpl23a-ps3A0A140T8M7 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Rpl23a-ps3A0A140T8M7 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Rpl23a-ps3A0A140T8M7 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rpl23a-ps3A0A140T8M7 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpl23a-ps3A0A140T8M7 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpl23a-ps3A0A140T8M7 Amer2-203ENSMUST00000225247 2662 ntBASIC20.6■□□□□ 0.89
Rpl23a-ps3A0A140T8M7 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rpl23a-ps3A0A140T8M7 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rpl23a-ps3A0A140T8M7 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.58■□□□□ 0.89
Rpl23a-ps3A0A140T8M7 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Rpl23a-ps3A0A140T8M7 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rpl23a-ps3A0A140T8M7 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rpl23a-ps3A0A140T8M7 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpl23a-ps3A0A140T8M7 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rpl23a-ps3A0A140T8M7 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Rpl23a-ps3A0A140T8M7 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Rpl23a-ps3A0A140T8M7 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rpl23a-ps3A0A140T8M7 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rpl23a-ps3A0A140T8M7 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rpl23a-ps3A0A140T8M7 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rpl23a-ps3A0A140T8M7 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rpl23a-ps3A0A140T8M7 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.51■□□□□ 0.87
Rpl23a-ps3A0A140T8M7 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.5■□□□□ 0.87
Rpl23a-ps3A0A140T8M7 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rpl23a-ps3A0A140T8M7 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpl23a-ps3A0A140T8M7 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rpl23a-ps3A0A140T8M7 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rpl23a-ps3A0A140T8M7 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rpl23a-ps3A0A140T8M7 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rpl23a-ps3A0A140T8M7 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rpl23a-ps3A0A140T8M7 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Rpl23a-ps3A0A140T8M7 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rpl23a-ps3A0A140T8M7 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.44■□□□□ 0.86
Rpl23a-ps3A0A140T8M7 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rpl23a-ps3A0A140T8M7 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.43■□□□□ 0.86
Rpl23a-ps3A0A140T8M7 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rpl23a-ps3A0A140T8M7 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Rpl23a-ps3A0A140T8M7 Zfp131-205ENSMUST00000223812 663 ntBASIC20.42■□□□□ 0.86
Rpl23a-ps3A0A140T8M7 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.41■□□□□ 0.86
Rpl23a-ps3A0A140T8M7 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Rpl23a-ps3A0A140T8M7 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rpl23a-ps3A0A140T8M7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rpl23a-ps3A0A140T8M7 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rpl23a-ps3A0A140T8M7 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 163.5 ms