Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Igkv3-5A0A140T8M6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC15.84■□□□□ 0.13
Igkv3-5A0A140T8M6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Igkv3-5A0A140T8M6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC15.83■□□□□ 0.12
Igkv3-5A0A140T8M6 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Igkv3-5A0A140T8M6 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Igkv3-5A0A140T8M6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Igkv3-5A0A140T8M6 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Igkv3-5A0A140T8M6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Igkv3-5A0A140T8M6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Igkv3-5A0A140T8M6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Igkv3-5A0A140T8M6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Igkv3-5A0A140T8M6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Igkv3-5A0A140T8M6 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Igkv3-5A0A140T8M6 Gm27322-201ENSMUST00000184007 104 ntBASIC15.79■□□□□ 0.12
Igkv3-5A0A140T8M6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Igkv3-5A0A140T8M6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Igkv3-5A0A140T8M6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Igkv3-5A0A140T8M6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Igkv3-5A0A140T8M6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC15.76■□□□□ 0.11
Igkv3-5A0A140T8M6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Igkv3-5A0A140T8M6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC15.76■□□□□ 0.11
Igkv3-5A0A140T8M6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Igkv3-5A0A140T8M6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC15.75■□□□□ 0.11
Igkv3-5A0A140T8M6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Igkv3-5A0A140T8M6 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Igkv3-5A0A140T8M6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Igkv3-5A0A140T8M6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Igkv3-5A0A140T8M6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
Igkv3-5A0A140T8M6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC15.74■□□□□ 0.11
Igkv3-5A0A140T8M6 AC166822.3-201ENSMUST00000227394 661 ntBASIC15.74■□□□□ 0.11
Igkv3-5A0A140T8M6 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Igkv3-5A0A140T8M6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Igkv3-5A0A140T8M6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Igkv3-5A0A140T8M6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC15.73■□□□□ 0.11
Igkv3-5A0A140T8M6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Igkv3-5A0A140T8M6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Igkv3-5A0A140T8M6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Igkv3-5A0A140T8M6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Igkv3-5A0A140T8M6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Igkv3-5A0A140T8M6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Igkv3-5A0A140T8M6 Gm17082-201ENSMUST00000166043 1091 ntBASIC15.72■□□□□ 0.11
Igkv3-5A0A140T8M6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Igkv3-5A0A140T8M6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Igkv3-5A0A140T8M6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Igkv3-5A0A140T8M6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Igkv3-5A0A140T8M6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Igkv3-5A0A140T8M6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Igkv3-5A0A140T8M6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Igkv3-5A0A140T8M6 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Igkv3-5A0A140T8M6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC15.68■□□□□ 0.1
Igkv3-5A0A140T8M6 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Igkv3-5A0A140T8M6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Igkv3-5A0A140T8M6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Igkv3-5A0A140T8M6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC15.68■□□□□ 0.1
Igkv3-5A0A140T8M6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Igkv3-5A0A140T8M6 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Igkv3-5A0A140T8M6 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Igkv3-5A0A140T8M6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Igkv3-5A0A140T8M6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Igkv3-5A0A140T8M6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Igkv3-5A0A140T8M6 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Igkv3-5A0A140T8M6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
Igkv3-5A0A140T8M6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Igkv3-5A0A140T8M6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Igkv3-5A0A140T8M6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Igkv3-5A0A140T8M6 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Igkv3-5A0A140T8M6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Igkv3-5A0A140T8M6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Igkv3-5A0A140T8M6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Igkv3-5A0A140T8M6 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Igkv3-5A0A140T8M6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Igkv3-5A0A140T8M6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Igkv3-5A0A140T8M6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Igkv3-5A0A140T8M6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Igkv3-5A0A140T8M6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Igkv3-5A0A140T8M6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Igkv3-5A0A140T8M6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Igkv3-5A0A140T8M6 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Igkv3-5A0A140T8M6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Igkv3-5A0A140T8M6 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Igkv3-5A0A140T8M6 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Igkv3-5A0A140T8M6 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Igkv3-5A0A140T8M6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Igkv3-5A0A140T8M6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Igkv3-5A0A140T8M6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Igkv3-5A0A140T8M6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Igkv3-5A0A140T8M6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Igkv3-5A0A140T8M6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Igkv3-5A0A140T8M6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Igkv3-5A0A140T8M6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Igkv3-5A0A140T8M6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Igkv3-5A0A140T8M6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Igkv3-5A0A140T8M6 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Igkv3-5A0A140T8M6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Igkv3-5A0A140T8M6 Gm26115-201ENSMUST00000175605 87 ntBASIC15.52■□□□□ 0.08
Igkv3-5A0A140T8M6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Igkv3-5A0A140T8M6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Igkv3-5A0A140T8M6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Igkv3-5A0A140T8M6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms