Protein–RNA interactions for Protein: A0A140T8K2

Rpl13a-ps1, Ribosomal protein 13A, pseudogene 1, mousemouse

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl13a-ps1A0A140T8K2 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.08■□□□□ 0.97
Rpl13a-ps1A0A140T8K2 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.07■□□□□ 0.96
Rpl13a-ps1A0A140T8K2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpl13a-ps1A0A140T8K2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpl13a-ps1A0A140T8K2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpl13a-ps1A0A140T8K2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpl13a-ps1A0A140T8K2 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Rpl13a-ps1A0A140T8K2 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpl13a-ps1A0A140T8K2 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rpl13a-ps1A0A140T8K2 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Rpl13a-ps1A0A140T8K2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
Rpl13a-ps1A0A140T8K2 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpl13a-ps1A0A140T8K2 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.01■□□□□ 0.95
Rpl13a-ps1A0A140T8K2 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rpl13a-ps1A0A140T8K2 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rpl13a-ps1A0A140T8K2 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Rpl13a-ps1A0A140T8K2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rpl13a-ps1A0A140T8K2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpl13a-ps1A0A140T8K2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rpl13a-ps1A0A140T8K2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rpl13a-ps1A0A140T8K2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rpl13a-ps1A0A140T8K2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rpl13a-ps1A0A140T8K2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rpl13a-ps1A0A140T8K2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rpl13a-ps1A0A140T8K2 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rpl13a-ps1A0A140T8K2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rpl13a-ps1A0A140T8K2 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rpl13a-ps1A0A140T8K2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Rpl13a-ps1A0A140T8K2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Rpl13a-ps1A0A140T8K2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rpl13a-ps1A0A140T8K2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rpl13a-ps1A0A140T8K2 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Rpl13a-ps1A0A140T8K2 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Rpl13a-ps1A0A140T8K2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.88■□□□□ 0.93
Rpl13a-ps1A0A140T8K2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpl13a-ps1A0A140T8K2 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpl13a-ps1A0A140T8K2 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
Rpl13a-ps1A0A140T8K2 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.87■□□□□ 0.93
Rpl13a-ps1A0A140T8K2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Rpl13a-ps1A0A140T8K2 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.85■□□□□ 0.93
Rpl13a-ps1A0A140T8K2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rpl13a-ps1A0A140T8K2 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rpl13a-ps1A0A140T8K2 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.85■□□□□ 0.93
Rpl13a-ps1A0A140T8K2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.85■□□□□ 0.93
Rpl13a-ps1A0A140T8K2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.83■□□□□ 0.93
Rpl13a-ps1A0A140T8K2 Gm8503-201ENSMUST00000118131 455 ntBASIC20.83■□□□□ 0.93
Rpl13a-ps1A0A140T8K2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.83■□□□□ 0.93
Rpl13a-ps1A0A140T8K2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rpl13a-ps1A0A140T8K2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpl13a-ps1A0A140T8K2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpl13a-ps1A0A140T8K2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
Rpl13a-ps1A0A140T8K2 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Rpl13a-ps1A0A140T8K2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rpl13a-ps1A0A140T8K2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Rpl13a-ps1A0A140T8K2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.78■□□□□ 0.92
Rpl13a-ps1A0A140T8K2 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rpl13a-ps1A0A140T8K2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Rpl13a-ps1A0A140T8K2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.77■□□□□ 0.92
Rpl13a-ps1A0A140T8K2 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Rpl13a-ps1A0A140T8K2 Gm6821-201ENSMUST00000107540 542 ntBASIC20.76■□□□□ 0.91
Rpl13a-ps1A0A140T8K2 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.76■□□□□ 0.91
Rpl13a-ps1A0A140T8K2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rpl13a-ps1A0A140T8K2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.75■□□□□ 0.91
Rpl13a-ps1A0A140T8K2 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rpl13a-ps1A0A140T8K2 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rpl13a-ps1A0A140T8K2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpl13a-ps1A0A140T8K2 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpl13a-ps1A0A140T8K2 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.72■□□□□ 0.91
Rpl13a-ps1A0A140T8K2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.71■□□□□ 0.91
Rpl13a-ps1A0A140T8K2 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpl13a-ps1A0A140T8K2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpl13a-ps1A0A140T8K2 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Rpl13a-ps1A0A140T8K2 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.7■□□□□ 0.9
Rpl13a-ps1A0A140T8K2 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpl13a-ps1A0A140T8K2 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpl13a-ps1A0A140T8K2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpl13a-ps1A0A140T8K2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpl13a-ps1A0A140T8K2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.67■□□□□ 0.9
Rpl13a-ps1A0A140T8K2 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpl13a-ps1A0A140T8K2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpl13a-ps1A0A140T8K2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpl13a-ps1A0A140T8K2 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rpl13a-ps1A0A140T8K2 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpl13a-ps1A0A140T8K2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rpl13a-ps1A0A140T8K2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Rpl13a-ps1A0A140T8K2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rpl13a-ps1A0A140T8K2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rpl13a-ps1A0A140T8K2 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rpl13a-ps1A0A140T8K2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rpl13a-ps1A0A140T8K2 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rpl13a-ps1A0A140T8K2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpl13a-ps1A0A140T8K2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpl13a-ps1A0A140T8K2 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Rpl13a-ps1A0A140T8K2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Rpl13a-ps1A0A140T8K2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Rpl13a-ps1A0A140T8K2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpl13a-ps1A0A140T8K2 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpl13a-ps1A0A140T8K2 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rpl13a-ps1A0A140T8K2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpl13a-ps1A0A140T8K2 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms