Protein–RNA interactions for Protein: A0A140LI04

Gm5890, Predicted gene 5890, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5890A0A140LI04 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.46■□□□□ 0.87
Gm5890A0A140LI04 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Gm5890A0A140LI04 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Gm5890A0A140LI04 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Gm5890A0A140LI04 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Gm5890A0A140LI04 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm5890A0A140LI04 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm5890A0A140LI04 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm5890A0A140LI04 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm5890A0A140LI04 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.41■□□□□ 0.86
Gm5890A0A140LI04 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm5890A0A140LI04 Mipep-204ENSMUST00000225043 1548 ntBASIC20.41■□□□□ 0.86
Gm5890A0A140LI04 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm5890A0A140LI04 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm5890A0A140LI04 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Gm5890A0A140LI04 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Gm5890A0A140LI04 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.37■□□□□ 0.85
Gm5890A0A140LI04 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.37■□□□□ 0.85
Gm5890A0A140LI04 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm5890A0A140LI04 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm5890A0A140LI04 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm5890A0A140LI04 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm5890A0A140LI04 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm5890A0A140LI04 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
Gm5890A0A140LI04 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm5890A0A140LI04 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm5890A0A140LI04 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Gm5890A0A140LI04 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm5890A0A140LI04 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm5890A0A140LI04 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Gm5890A0A140LI04 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm5890A0A140LI04 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Gm5890A0A140LI04 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm5890A0A140LI04 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.31■□□□□ 0.84
Gm5890A0A140LI04 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm5890A0A140LI04 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.29■□□□□ 0.84
Gm5890A0A140LI04 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm5890A0A140LI04 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gm5890A0A140LI04 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Gm5890A0A140LI04 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm5890A0A140LI04 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Gm5890A0A140LI04 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.25■□□□□ 0.83
Gm5890A0A140LI04 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Gm5890A0A140LI04 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Gm5890A0A140LI04 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm5890A0A140LI04 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gm5890A0A140LI04 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm5890A0A140LI04 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.2■□□□□ 0.82
Gm5890A0A140LI04 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm5890A0A140LI04 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm5890A0A140LI04 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Gm5890A0A140LI04 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm5890A0A140LI04 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm5890A0A140LI04 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Gm5890A0A140LI04 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.18■□□□□ 0.82
Gm5890A0A140LI04 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Gm5890A0A140LI04 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.17■□□□□ 0.82
Gm5890A0A140LI04 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5890A0A140LI04 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5890A0A140LI04 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5890A0A140LI04 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5890A0A140LI04 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5890A0A140LI04 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Gm5890A0A140LI04 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Gm5890A0A140LI04 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.13■□□□□ 0.81
Gm5890A0A140LI04 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm5890A0A140LI04 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Gm5890A0A140LI04 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm5890A0A140LI04 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm5890A0A140LI04 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm5890A0A140LI04 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Gm5890A0A140LI04 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm5890A0A140LI04 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm5890A0A140LI04 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm5890A0A140LI04 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm5890A0A140LI04 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm5890A0A140LI04 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.09■□□□□ 0.81
Gm5890A0A140LI04 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm5890A0A140LI04 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Gm5890A0A140LI04 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Gm5890A0A140LI04 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm5890A0A140LI04 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gm5890A0A140LI04 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm5890A0A140LI04 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Gm5890A0A140LI04 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm5890A0A140LI04 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Gm5890A0A140LI04 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm5890A0A140LI04 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Gm5890A0A140LI04 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm5890A0A140LI04 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm5890A0A140LI04 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Gm5890A0A140LI04 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm5890A0A140LI04 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm5890A0A140LI04 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm5890A0A140LI04 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm5890A0A140LI04 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm5890A0A140LI04 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Gm5890A0A140LI04 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm5890A0A140LI04 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Gm5890A0A140LI04 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms