Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav9d-4A0A0G2JG37 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav9d-4A0A0G2JG37 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC17.13■□□□□ 0.33
Trav9d-4A0A0G2JG37 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trav9d-4A0A0G2JG37 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav9d-4A0A0G2JG37 Amer2-203ENSMUST00000225247 2662 ntBASIC17.12■□□□□ 0.33
Trav9d-4A0A0G2JG37 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav9d-4A0A0G2JG37 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC17.12■□□□□ 0.33
Trav9d-4A0A0G2JG37 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav9d-4A0A0G2JG37 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav9d-4A0A0G2JG37 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav9d-4A0A0G2JG37 Mipep-204ENSMUST00000225043 1548 ntBASIC17.11■□□□□ 0.33
Trav9d-4A0A0G2JG37 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav9d-4A0A0G2JG37 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav9d-4A0A0G2JG37 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav9d-4A0A0G2JG37 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Trav9d-4A0A0G2JG37 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav9d-4A0A0G2JG37 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav9d-4A0A0G2JG37 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav9d-4A0A0G2JG37 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav9d-4A0A0G2JG37 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav9d-4A0A0G2JG37 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav9d-4A0A0G2JG37 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav9d-4A0A0G2JG37 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav9d-4A0A0G2JG37 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav9d-4A0A0G2JG37 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav9d-4A0A0G2JG37 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav9d-4A0A0G2JG37 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.05■□□□□ 0.32
Trav9d-4A0A0G2JG37 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Trav9d-4A0A0G2JG37 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav9d-4A0A0G2JG37 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav9d-4A0A0G2JG37 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Trav9d-4A0A0G2JG37 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav9d-4A0A0G2JG37 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Trav9d-4A0A0G2JG37 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav9d-4A0A0G2JG37 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav9d-4A0A0G2JG37 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav9d-4A0A0G2JG37 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Trav9d-4A0A0G2JG37 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trav9d-4A0A0G2JG37 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav9d-4A0A0G2JG37 AL845457.1-201ENSMUST00000197244 68 ntBASIC17■□□□□ 0.31
Trav9d-4A0A0G2JG37 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trav9d-4A0A0G2JG37 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav9d-4A0A0G2JG37 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav9d-4A0A0G2JG37 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trav9d-4A0A0G2JG37 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trav9d-4A0A0G2JG37 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav9d-4A0A0G2JG37 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav9d-4A0A0G2JG37 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav9d-4A0A0G2JG37 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav9d-4A0A0G2JG37 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav9d-4A0A0G2JG37 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav9d-4A0A0G2JG37 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trav9d-4A0A0G2JG37 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Trav9d-4A0A0G2JG37 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav9d-4A0A0G2JG37 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav9d-4A0A0G2JG37 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav9d-4A0A0G2JG37 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav9d-4A0A0G2JG37 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trav9d-4A0A0G2JG37 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav9d-4A0A0G2JG37 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav9d-4A0A0G2JG37 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC16.92■□□□□ 0.3
Trav9d-4A0A0G2JG37 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav9d-4A0A0G2JG37 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trav9d-4A0A0G2JG37 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav9d-4A0A0G2JG37 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Trav9d-4A0A0G2JG37 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav9d-4A0A0G2JG37 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav9d-4A0A0G2JG37 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trav9d-4A0A0G2JG37 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav9d-4A0A0G2JG37 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav9d-4A0A0G2JG37 Fezf2-202ENSMUST00000224023 1917 ntBASIC16.87■□□□□ 0.29
Trav9d-4A0A0G2JG37 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav9d-4A0A0G2JG37 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC16.86■□□□□ 0.29
Trav9d-4A0A0G2JG37 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav9d-4A0A0G2JG37 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav9d-4A0A0G2JG37 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC16.84■□□□□ 0.29
Trav9d-4A0A0G2JG37 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav9d-4A0A0G2JG37 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC16.83■□□□□ 0.28
Trav9d-4A0A0G2JG37 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav9d-4A0A0G2JG37 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav9d-4A0A0G2JG37 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav9d-4A0A0G2JG37 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trav9d-4A0A0G2JG37 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav9d-4A0A0G2JG37 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav9d-4A0A0G2JG37 Gm6345-201ENSMUST00000180378 1691 ntBASIC16.82■□□□□ 0.28
Trav9d-4A0A0G2JG37 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC16.82■□□□□ 0.28
Trav9d-4A0A0G2JG37 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav9d-4A0A0G2JG37 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC16.82■□□□□ 0.28
Trav9d-4A0A0G2JG37 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Trav9d-4A0A0G2JG37 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav9d-4A0A0G2JG37 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav9d-4A0A0G2JG37 Gm25262-201ENSMUST00000174934 133 ntBASIC16.81■□□□□ 0.28
Trav9d-4A0A0G2JG37 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav9d-4A0A0G2JG37 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trav9d-4A0A0G2JG37 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav9d-4A0A0G2JG37 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav9d-4A0A0G2JG37 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav9d-4A0A0G2JG37 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav9d-4A0A0G2JG37 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 7.7 ms