Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Igkv8-27A0A0G2JF28 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Igkv8-27A0A0G2JF28 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Igkv8-27A0A0G2JF28 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Igkv8-27A0A0G2JF28 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Igkv8-27A0A0G2JF28 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC15.8■□□□□ 0.12
Igkv8-27A0A0G2JF28 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Igkv8-27A0A0G2JF28 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Igkv8-27A0A0G2JF28 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC15.79■□□□□ 0.12
Igkv8-27A0A0G2JF28 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Igkv8-27A0A0G2JF28 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Igkv8-27A0A0G2JF28 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Igkv8-27A0A0G2JF28 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Igkv8-27A0A0G2JF28 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Igkv8-27A0A0G2JF28 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Igkv8-27A0A0G2JF28 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Igkv8-27A0A0G2JF28 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Igkv8-27A0A0G2JF28 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Igkv8-27A0A0G2JF28 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Igkv8-27A0A0G2JF28 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Igkv8-27A0A0G2JF28 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Igkv8-27A0A0G2JF28 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Igkv8-27A0A0G2JF28 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Igkv8-27A0A0G2JF28 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Igkv8-27A0A0G2JF28 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC15.73■□□□□ 0.11
Igkv8-27A0A0G2JF28 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Igkv8-27A0A0G2JF28 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Igkv8-27A0A0G2JF28 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Igkv8-27A0A0G2JF28 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Igkv8-27A0A0G2JF28 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Igkv8-27A0A0G2JF28 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Igkv8-27A0A0G2JF28 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Igkv8-27A0A0G2JF28 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Igkv8-27A0A0G2JF28 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC15.69■□□□□ 0.1
Igkv8-27A0A0G2JF28 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Igkv8-27A0A0G2JF28 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Igkv8-27A0A0G2JF28 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Igkv8-27A0A0G2JF28 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Igkv8-27A0A0G2JF28 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Igkv8-27A0A0G2JF28 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Igkv8-27A0A0G2JF28 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC15.68■□□□□ 0.1
Igkv8-27A0A0G2JF28 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC15.67■□□□□ 0.1
Igkv8-27A0A0G2JF28 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Igkv8-27A0A0G2JF28 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Igkv8-27A0A0G2JF28 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Igkv8-27A0A0G2JF28 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Igkv8-27A0A0G2JF28 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Igkv8-27A0A0G2JF28 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Igkv8-27A0A0G2JF28 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Igkv8-27A0A0G2JF28 Gm6345-201ENSMUST00000180378 1691 ntBASIC15.64■□□□□ 0.09
Igkv8-27A0A0G2JF28 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Igkv8-27A0A0G2JF28 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC15.64■□□□□ 0.09
Igkv8-27A0A0G2JF28 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Igkv8-27A0A0G2JF28 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Igkv8-27A0A0G2JF28 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Igkv8-27A0A0G2JF28 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Igkv8-27A0A0G2JF28 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Igkv8-27A0A0G2JF28 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Igkv8-27A0A0G2JF28 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Igkv8-27A0A0G2JF28 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Igkv8-27A0A0G2JF28 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Igkv8-27A0A0G2JF28 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Igkv8-27A0A0G2JF28 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Igkv8-27A0A0G2JF28 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Igkv8-27A0A0G2JF28 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Igkv8-27A0A0G2JF28 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Igkv8-27A0A0G2JF28 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Igkv8-27A0A0G2JF28 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Igkv8-27A0A0G2JF28 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Igkv8-27A0A0G2JF28 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Igkv8-27A0A0G2JF28 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Igkv8-27A0A0G2JF28 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Igkv8-27A0A0G2JF28 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Igkv8-27A0A0G2JF28 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Igkv8-27A0A0G2JF28 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC15.54■□□□□ 0.08
Igkv8-27A0A0G2JF28 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Igkv8-27A0A0G2JF28 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Igkv8-27A0A0G2JF28 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Igkv8-27A0A0G2JF28 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Igkv8-27A0A0G2JF28 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Igkv8-27A0A0G2JF28 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Igkv8-27A0A0G2JF28 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Igkv8-27A0A0G2JF28 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Igkv8-27A0A0G2JF28 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Igkv8-27A0A0G2JF28 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Igkv8-27A0A0G2JF28 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Igkv8-27A0A0G2JF28 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Igkv8-27A0A0G2JF28 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Igkv8-27A0A0G2JF28 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Igkv8-27A0A0G2JF28 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Igkv8-27A0A0G2JF28 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Igkv8-27A0A0G2JF28 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Igkv8-27A0A0G2JF28 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Igkv8-27A0A0G2JF28 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Igkv8-27A0A0G2JF28 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Igkv8-27A0A0G2JF28 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Igkv8-27A0A0G2JF28 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Igkv8-27A0A0G2JF28 Mipep-204ENSMUST00000225043 1548 ntBASIC15.47■□□□□ 0.07
Igkv8-27A0A0G2JF28 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
Igkv8-27A0A0G2JF28 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms