Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Igkv8-28A0A0G2JE47 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Igkv8-28A0A0G2JE47 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC15.74■□□□□ 0.11
Igkv8-28A0A0G2JE47 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Igkv8-28A0A0G2JE47 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Igkv8-28A0A0G2JE47 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Igkv8-28A0A0G2JE47 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC15.73■□□□□ 0.11
Igkv8-28A0A0G2JE47 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Igkv8-28A0A0G2JE47 Fezf2-202ENSMUST00000224023 1917 ntBASIC15.72■□□□□ 0.11
Igkv8-28A0A0G2JE47 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Igkv8-28A0A0G2JE47 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Igkv8-28A0A0G2JE47 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Igkv8-28A0A0G2JE47 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Igkv8-28A0A0G2JE47 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Igkv8-28A0A0G2JE47 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC15.71■□□□□ 0.1
Igkv8-28A0A0G2JE47 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Igkv8-28A0A0G2JE47 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Igkv8-28A0A0G2JE47 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Igkv8-28A0A0G2JE47 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Igkv8-28A0A0G2JE47 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Igkv8-28A0A0G2JE47 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Igkv8-28A0A0G2JE47 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Igkv8-28A0A0G2JE47 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Igkv8-28A0A0G2JE47 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Igkv8-28A0A0G2JE47 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Igkv8-28A0A0G2JE47 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC15.64■□□□□ 0.09
Igkv8-28A0A0G2JE47 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Igkv8-28A0A0G2JE47 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Igkv8-28A0A0G2JE47 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Igkv8-28A0A0G2JE47 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Igkv8-28A0A0G2JE47 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Igkv8-28A0A0G2JE47 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC15.62■□□□□ 0.09
Igkv8-28A0A0G2JE47 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC15.61■□□□□ 0.09
Igkv8-28A0A0G2JE47 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Igkv8-28A0A0G2JE47 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Igkv8-28A0A0G2JE47 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Igkv8-28A0A0G2JE47 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Igkv8-28A0A0G2JE47 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC15.6■□□□□ 0.09
Igkv8-28A0A0G2JE47 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Igkv8-28A0A0G2JE47 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Igkv8-28A0A0G2JE47 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Igkv8-28A0A0G2JE47 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Igkv8-28A0A0G2JE47 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Igkv8-28A0A0G2JE47 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Igkv8-28A0A0G2JE47 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Igkv8-28A0A0G2JE47 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC15.57■□□□□ 0.08
Igkv8-28A0A0G2JE47 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Igkv8-28A0A0G2JE47 AC153890.1-201ENSMUST00000220021 2469 ntBASIC15.55■□□□□ 0.08
Igkv8-28A0A0G2JE47 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Igkv8-28A0A0G2JE47 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Igkv8-28A0A0G2JE47 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Igkv8-28A0A0G2JE47 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Igkv8-28A0A0G2JE47 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC15.54■□□□□ 0.08
Igkv8-28A0A0G2JE47 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Igkv8-28A0A0G2JE47 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Igkv8-28A0A0G2JE47 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC15.53■□□□□ 0.08
Igkv8-28A0A0G2JE47 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Igkv8-28A0A0G2JE47 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Igkv8-28A0A0G2JE47 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Igkv8-28A0A0G2JE47 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Igkv8-28A0A0G2JE47 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Igkv8-28A0A0G2JE47 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Igkv8-28A0A0G2JE47 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Igkv8-28A0A0G2JE47 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Igkv8-28A0A0G2JE47 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC15.5■□□□□ 0.07
Igkv8-28A0A0G2JE47 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Igkv8-28A0A0G2JE47 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Igkv8-28A0A0G2JE47 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Igkv8-28A0A0G2JE47 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Igkv8-28A0A0G2JE47 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Igkv8-28A0A0G2JE47 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Igkv8-28A0A0G2JE47 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Igkv8-28A0A0G2JE47 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Igkv8-28A0A0G2JE47 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Igkv8-28A0A0G2JE47 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Igkv8-28A0A0G2JE47 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Igkv8-28A0A0G2JE47 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Igkv8-28A0A0G2JE47 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Igkv8-28A0A0G2JE47 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Igkv8-28A0A0G2JE47 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Igkv8-28A0A0G2JE47 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Igkv8-28A0A0G2JE47 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Igkv8-28A0A0G2JE47 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Igkv8-28A0A0G2JE47 Rab21-202ENSMUST00000218831 843 ntBASIC15.45■□□□□ 0.06
Igkv8-28A0A0G2JE47 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Igkv8-28A0A0G2JE47 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC15.44■□□□□ 0.06
Igkv8-28A0A0G2JE47 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Igkv8-28A0A0G2JE47 Gm6345-201ENSMUST00000180378 1691 ntBASIC15.44■□□□□ 0.06
Igkv8-28A0A0G2JE47 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Igkv8-28A0A0G2JE47 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC15.43■□□□□ 0.06
Igkv8-28A0A0G2JE47 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Igkv8-28A0A0G2JE47 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Igkv8-28A0A0G2JE47 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Igkv8-28A0A0G2JE47 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Igkv8-28A0A0G2JE47 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Igkv8-28A0A0G2JE47 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Igkv8-28A0A0G2JE47 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Igkv8-28A0A0G2JE47 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Igkv8-28A0A0G2JE47 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Igkv8-28A0A0G2JE47 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 253 ms