Protein–RNA interactions for Protein: A0A0B4J1J1

Igkv5-45, Immunoglobulin kappa chain variable 5-45 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-45A0A0B4J1J1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Igkv5-45A0A0B4J1J1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Igkv5-45A0A0B4J1J1 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
Igkv5-45A0A0B4J1J1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
Igkv5-45A0A0B4J1J1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Igkv5-45A0A0B4J1J1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Igkv5-45A0A0B4J1J1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Igkv5-45A0A0B4J1J1 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Igkv5-45A0A0B4J1J1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Igkv5-45A0A0B4J1J1 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Igkv5-45A0A0B4J1J1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Igkv5-45A0A0B4J1J1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Igkv5-45A0A0B4J1J1 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
Igkv5-45A0A0B4J1J1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
Igkv5-45A0A0B4J1J1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Igkv5-45A0A0B4J1J1 Gm9397-201ENSMUST00000200125 605 ntBASIC26.54■■□□□ 1.84
Igkv5-45A0A0B4J1J1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Igkv5-45A0A0B4J1J1 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Igkv5-45A0A0B4J1J1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Igkv5-45A0A0B4J1J1 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
Igkv5-45A0A0B4J1J1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.51■■□□□ 1.83
Igkv5-45A0A0B4J1J1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.5■■□□□ 1.83
Igkv5-45A0A0B4J1J1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Igkv5-45A0A0B4J1J1 Gm45855-201ENSMUST00000212546 880 ntBASIC26.49■■□□□ 1.83
Igkv5-45A0A0B4J1J1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC26.49■■□□□ 1.83
Igkv5-45A0A0B4J1J1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.47■■□□□ 1.83
Igkv5-45A0A0B4J1J1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26.46■■□□□ 1.83
Igkv5-45A0A0B4J1J1 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Igkv5-45A0A0B4J1J1 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.45■■□□□ 1.82
Igkv5-45A0A0B4J1J1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.45■■□□□ 1.82
Igkv5-45A0A0B4J1J1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Igkv5-45A0A0B4J1J1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
Igkv5-45A0A0B4J1J1 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Igkv5-45A0A0B4J1J1 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.44■■□□□ 1.82
Igkv5-45A0A0B4J1J1 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Igkv5-45A0A0B4J1J1 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Igkv5-45A0A0B4J1J1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Igkv5-45A0A0B4J1J1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Igkv5-45A0A0B4J1J1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Igkv5-45A0A0B4J1J1 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Igkv5-45A0A0B4J1J1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Igkv5-45A0A0B4J1J1 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Igkv5-45A0A0B4J1J1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Igkv5-45A0A0B4J1J1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.36■■□□□ 1.81
Igkv5-45A0A0B4J1J1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Igkv5-45A0A0B4J1J1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.35■■□□□ 1.81
Igkv5-45A0A0B4J1J1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Igkv5-45A0A0B4J1J1 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Igkv5-45A0A0B4J1J1 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
Igkv5-45A0A0B4J1J1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
Igkv5-45A0A0B4J1J1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.31■■□□□ 1.8
Igkv5-45A0A0B4J1J1 Gm24970-201ENSMUST00000175582 82 ntBASIC26.3■■□□□ 1.8
Igkv5-45A0A0B4J1J1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC26.3■■□□□ 1.8
Igkv5-45A0A0B4J1J1 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC26.3■■□□□ 1.8
Igkv5-45A0A0B4J1J1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC26.29■■□□□ 1.8
Igkv5-45A0A0B4J1J1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Igkv5-45A0A0B4J1J1 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Igkv5-45A0A0B4J1J1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Igkv5-45A0A0B4J1J1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Igkv5-45A0A0B4J1J1 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Igkv5-45A0A0B4J1J1 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Igkv5-45A0A0B4J1J1 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Igkv5-45A0A0B4J1J1 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
Igkv5-45A0A0B4J1J1 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Igkv5-45A0A0B4J1J1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Igkv5-45A0A0B4J1J1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26.26■■□□□ 1.79
Igkv5-45A0A0B4J1J1 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Igkv5-45A0A0B4J1J1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Igkv5-45A0A0B4J1J1 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Igkv5-45A0A0B4J1J1 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Igkv5-45A0A0B4J1J1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.23■■□□□ 1.79
Igkv5-45A0A0B4J1J1 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.23■■□□□ 1.79
Igkv5-45A0A0B4J1J1 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Igkv5-45A0A0B4J1J1 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Igkv5-45A0A0B4J1J1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
Igkv5-45A0A0B4J1J1 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
Igkv5-45A0A0B4J1J1 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26.2■■□□□ 1.79
Igkv5-45A0A0B4J1J1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Igkv5-45A0A0B4J1J1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Igkv5-45A0A0B4J1J1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Igkv5-45A0A0B4J1J1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Igkv5-45A0A0B4J1J1 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Igkv5-45A0A0B4J1J1 Gm43863-201ENSMUST00000203822 1192 ntBASIC26.16■■□□□ 1.78
Igkv5-45A0A0B4J1J1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Igkv5-45A0A0B4J1J1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.77
Igkv5-45A0A0B4J1J1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
Igkv5-45A0A0B4J1J1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Igkv5-45A0A0B4J1J1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Igkv5-45A0A0B4J1J1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Igkv5-45A0A0B4J1J1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC26.12■■□□□ 1.77
Igkv5-45A0A0B4J1J1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Igkv5-45A0A0B4J1J1 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
Igkv5-45A0A0B4J1J1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Igkv5-45A0A0B4J1J1 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Igkv5-45A0A0B4J1J1 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Igkv5-45A0A0B4J1J1 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Igkv5-45A0A0B4J1J1 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Igkv5-45A0A0B4J1J1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.1■■□□□ 1.77
Igkv5-45A0A0B4J1J1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Igkv5-45A0A0B4J1J1 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms