Protein–RNA interactions for Protein: A0A087WP44

Gm28897, Predicted gene 28827, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28897A0A087WP44 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Gm28897A0A087WP44 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Gm28897A0A087WP44 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Gm28897A0A087WP44 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Gm28897A0A087WP44 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22.15■■□□□ 1.14
Gm28897A0A087WP44 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC22.14■■□□□ 1.13
Gm28897A0A087WP44 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Gm28897A0A087WP44 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.12■■□□□ 1.13
Gm28897A0A087WP44 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Gm28897A0A087WP44 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Gm28897A0A087WP44 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Gm28897A0A087WP44 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Gm28897A0A087WP44 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Gm28897A0A087WP44 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
Gm28897A0A087WP44 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Gm28897A0A087WP44 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Gm28897A0A087WP44 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Gm28897A0A087WP44 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm28897A0A087WP44 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm28897A0A087WP44 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm28897A0A087WP44 AL845457.1-201ENSMUST00000197244 68 ntBASIC22.06■■□□□ 1.12
Gm28897A0A087WP44 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Gm28897A0A087WP44 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Gm28897A0A087WP44 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Gm28897A0A087WP44 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Gm28897A0A087WP44 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm28897A0A087WP44 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm28897A0A087WP44 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.03■■□□□ 1.12
Gm28897A0A087WP44 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm28897A0A087WP44 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm28897A0A087WP44 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm28897A0A087WP44 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Gm28897A0A087WP44 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Gm28897A0A087WP44 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22■■□□□ 1.11
Gm28897A0A087WP44 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Gm28897A0A087WP44 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Gm28897A0A087WP44 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Gm28897A0A087WP44 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Gm28897A0A087WP44 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm28897A0A087WP44 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.98■■□□□ 1.11
Gm28897A0A087WP44 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm28897A0A087WP44 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm28897A0A087WP44 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm28897A0A087WP44 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm28897A0A087WP44 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm28897A0A087WP44 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Gm28897A0A087WP44 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Gm28897A0A087WP44 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Gm28897A0A087WP44 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Gm28897A0A087WP44 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Gm28897A0A087WP44 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.96■■□□□ 1.11
Gm28897A0A087WP44 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Gm28897A0A087WP44 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Gm28897A0A087WP44 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.94■■□□□ 1.1
Gm28897A0A087WP44 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Gm28897A0A087WP44 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Gm28897A0A087WP44 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
Gm28897A0A087WP44 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Gm28897A0A087WP44 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Gm28897A0A087WP44 Amer2-203ENSMUST00000225247 2662 ntBASIC21.85■■□□□ 1.09
Gm28897A0A087WP44 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
Gm28897A0A087WP44 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Gm28897A0A087WP44 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gm28897A0A087WP44 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
Gm28897A0A087WP44 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gm28897A0A087WP44 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm28897A0A087WP44 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm28897A0A087WP44 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm28897A0A087WP44 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Gm28897A0A087WP44 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm28897A0A087WP44 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Gm28897A0A087WP44 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Gm28897A0A087WP44 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gm28897A0A087WP44 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Gm28897A0A087WP44 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Gm28897A0A087WP44 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Gm28897A0A087WP44 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gm28897A0A087WP44 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.75■■□□□ 1.07
Gm28897A0A087WP44 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm28897A0A087WP44 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm28897A0A087WP44 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm28897A0A087WP44 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
Gm28897A0A087WP44 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Gm28897A0A087WP44 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Gm28897A0A087WP44 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gm28897A0A087WP44 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gm28897A0A087WP44 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gm28897A0A087WP44 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Gm28897A0A087WP44 Gm25262-201ENSMUST00000174934 133 ntBASIC21.7■■□□□ 1.06
Gm28897A0A087WP44 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Gm28897A0A087WP44 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
Gm28897A0A087WP44 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm28897A0A087WP44 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.68■■□□□ 1.06
Gm28897A0A087WP44 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gm28897A0A087WP44 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.68■■□□□ 1.06
Gm28897A0A087WP44 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Gm28897A0A087WP44 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm28897A0A087WP44 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm28897A0A087WP44 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm28897A0A087WP44 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms