Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav6-4A0A075B6B4 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav6-4A0A075B6B4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav6-4A0A075B6B4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav6-4A0A075B6B4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Trav6-4A0A075B6B4 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav6-4A0A075B6B4 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Trav6-4A0A075B6B4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trav6-4A0A075B6B4 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav6-4A0A075B6B4 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Trav6-4A0A075B6B4 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Trav6-4A0A075B6B4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav6-4A0A075B6B4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav6-4A0A075B6B4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.42■□□□□ 0.7
Trav6-4A0A075B6B4 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trav6-4A0A075B6B4 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trav6-4A0A075B6B4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav6-4A0A075B6B4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.4■□□□□ 0.7
Trav6-4A0A075B6B4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav6-4A0A075B6B4 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Trav6-4A0A075B6B4 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trav6-4A0A075B6B4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav6-4A0A075B6B4 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Trav6-4A0A075B6B4 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav6-4A0A075B6B4 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav6-4A0A075B6B4 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.37■□□□□ 0.69
Trav6-4A0A075B6B4 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav6-4A0A075B6B4 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trav6-4A0A075B6B4 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav6-4A0A075B6B4 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trav6-4A0A075B6B4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.35■□□□□ 0.69
Trav6-4A0A075B6B4 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trav6-4A0A075B6B4 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trav6-4A0A075B6B4 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.33■□□□□ 0.69
Trav6-4A0A075B6B4 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trav6-4A0A075B6B4 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.33■□□□□ 0.68
Trav6-4A0A075B6B4 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Trav6-4A0A075B6B4 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Trav6-4A0A075B6B4 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav6-4A0A075B6B4 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav6-4A0A075B6B4 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trav6-4A0A075B6B4 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.3■□□□□ 0.68
Trav6-4A0A075B6B4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Trav6-4A0A075B6B4 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav6-4A0A075B6B4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav6-4A0A075B6B4 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav6-4A0A075B6B4 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Trav6-4A0A075B6B4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav6-4A0A075B6B4 Zfp131-205ENSMUST00000223812 663 ntBASIC19.29■□□□□ 0.68
Trav6-4A0A075B6B4 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav6-4A0A075B6B4 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav6-4A0A075B6B4 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav6-4A0A075B6B4 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trav6-4A0A075B6B4 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav6-4A0A075B6B4 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav6-4A0A075B6B4 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trav6-4A0A075B6B4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trav6-4A0A075B6B4 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav6-4A0A075B6B4 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Trav6-4A0A075B6B4 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Trav6-4A0A075B6B4 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.21■□□□□ 0.67
Trav6-4A0A075B6B4 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.21■□□□□ 0.67
Trav6-4A0A075B6B4 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.21■□□□□ 0.67
Trav6-4A0A075B6B4 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav6-4A0A075B6B4 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Trav6-4A0A075B6B4 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trav6-4A0A075B6B4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav6-4A0A075B6B4 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav6-4A0A075B6B4 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav6-4A0A075B6B4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav6-4A0A075B6B4 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav6-4A0A075B6B4 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav6-4A0A075B6B4 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav6-4A0A075B6B4 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.16■□□□□ 0.66
Trav6-4A0A075B6B4 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.16■□□□□ 0.66
Trav6-4A0A075B6B4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav6-4A0A075B6B4 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trav6-4A0A075B6B4 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav6-4A0A075B6B4 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.15■□□□□ 0.66
Trav6-4A0A075B6B4 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav6-4A0A075B6B4 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav6-4A0A075B6B4 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav6-4A0A075B6B4 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav6-4A0A075B6B4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.12■□□□□ 0.65
Trav6-4A0A075B6B4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trav6-4A0A075B6B4 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trav6-4A0A075B6B4 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trav6-4A0A075B6B4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav6-4A0A075B6B4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav6-4A0A075B6B4 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trav6-4A0A075B6B4 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Trav6-4A0A075B6B4 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Trav6-4A0A075B6B4 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Trav6-4A0A075B6B4 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Trav6-4A0A075B6B4 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trav6-4A0A075B6B4 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Trav6-4A0A075B6B4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav6-4A0A075B6B4 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav6-4A0A075B6B4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trav6-4A0A075B6B4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms