Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Gm8109-201ENSMUST00000194076 746 ntBASIC19.39■□□□□ 0.69
Trav9d-1A0A075B699 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav9d-1A0A075B699 Gm26115-201ENSMUST00000175605 87 ntBASIC19.38■□□□□ 0.69
Trav9d-1A0A075B699 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav9d-1A0A075B699 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Trav9d-1A0A075B699 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav9d-1A0A075B699 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trav9d-1A0A075B699 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.35■□□□□ 0.69
Trav9d-1A0A075B699 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav9d-1A0A075B699 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trav9d-1A0A075B699 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
Trav9d-1A0A075B699 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trav9d-1A0A075B699 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Trav9d-1A0A075B699 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav9d-1A0A075B699 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav9d-1A0A075B699 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav9d-1A0A075B699 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trav9d-1A0A075B699 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.31■□□□□ 0.68
Trav9d-1A0A075B699 Amer2-203ENSMUST00000225247 2662 ntBASIC19.3■□□□□ 0.68
Trav9d-1A0A075B699 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav9d-1A0A075B699 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav9d-1A0A075B699 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
Trav9d-1A0A075B699 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav9d-1A0A075B699 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav9d-1A0A075B699 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trav9d-1A0A075B699 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.28■□□□□ 0.68
Trav9d-1A0A075B699 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trav9d-1A0A075B699 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav9d-1A0A075B699 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.26■□□□□ 0.67
Trav9d-1A0A075B699 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav9d-1A0A075B699 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav9d-1A0A075B699 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trav9d-1A0A075B699 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav9d-1A0A075B699 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav9d-1A0A075B699 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.24■□□□□ 0.67
Trav9d-1A0A075B699 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Trav9d-1A0A075B699 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trav9d-1A0A075B699 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trav9d-1A0A075B699 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav9d-1A0A075B699 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Trav9d-1A0A075B699 Peli2-204ENSMUST00000226513 1320 ntBASIC19.22■□□□□ 0.67
Trav9d-1A0A075B699 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trav9d-1A0A075B699 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav9d-1A0A075B699 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav9d-1A0A075B699 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trav9d-1A0A075B699 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trav9d-1A0A075B699 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trav9d-1A0A075B699 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trav9d-1A0A075B699 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Trav9d-1A0A075B699 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.18■□□□□ 0.66
Trav9d-1A0A075B699 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav9d-1A0A075B699 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav9d-1A0A075B699 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav9d-1A0A075B699 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.17■□□□□ 0.66
Trav9d-1A0A075B699 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.16■□□□□ 0.66
Trav9d-1A0A075B699 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav9d-1A0A075B699 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav9d-1A0A075B699 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav9d-1A0A075B699 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav9d-1A0A075B699 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Trav9d-1A0A075B699 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav9d-1A0A075B699 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trav9d-1A0A075B699 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav9d-1A0A075B699 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav9d-1A0A075B699 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Trav9d-1A0A075B699 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav9d-1A0A075B699 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav9d-1A0A075B699 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Trav9d-1A0A075B699 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Trav9d-1A0A075B699 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav9d-1A0A075B699 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Trav9d-1A0A075B699 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trav9d-1A0A075B699 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav9d-1A0A075B699 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav9d-1A0A075B699 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trav9d-1A0A075B699 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.08■□□□□ 0.64
Trav9d-1A0A075B699 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav9d-1A0A075B699 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Trav9d-1A0A075B699 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trav9d-1A0A075B699 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav9d-1A0A075B699 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav9d-1A0A075B699 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav9d-1A0A075B699 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.05■□□□□ 0.64
Trav9d-1A0A075B699 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trav9d-1A0A075B699 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav9d-1A0A075B699 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav9d-1A0A075B699 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav9d-1A0A075B699 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav9d-1A0A075B699 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Trav9d-1A0A075B699 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav9d-1A0A075B699 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Trav9d-1A0A075B699 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav9d-1A0A075B699 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trav9d-1A0A075B699 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav9d-1A0A075B699 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Trav9d-1A0A075B699 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav9d-1A0A075B699 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Trav9d-1A0A075B699 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trav9d-1A0A075B699 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav9d-1A0A075B699 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms