Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Amer2-203ENSMUST00000225247 2662 ntBASIC19.96■□□□□ 0.79
Trav17A0A075B655 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trav17A0A075B655 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trav17A0A075B655 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav17A0A075B655 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav17A0A075B655 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Trav17A0A075B655 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav17A0A075B655 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav17A0A075B655 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Trav17A0A075B655 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trav17A0A075B655 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Trav17A0A075B655 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.89■□□□□ 0.77
Trav17A0A075B655 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trav17A0A075B655 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trav17A0A075B655 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav17A0A075B655 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav17A0A075B655 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Trav17A0A075B655 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav17A0A075B655 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trav17A0A075B655 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trav17A0A075B655 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.84■□□□□ 0.77
Trav17A0A075B655 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.84■□□□□ 0.77
Trav17A0A075B655 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav17A0A075B655 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trav17A0A075B655 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav17A0A075B655 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trav17A0A075B655 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav17A0A075B655 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trav17A0A075B655 Gm25262-201ENSMUST00000174934 133 ntBASIC19.82■□□□□ 0.76
Trav17A0A075B655 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trav17A0A075B655 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Trav17A0A075B655 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav17A0A075B655 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.8■□□□□ 0.76
Trav17A0A075B655 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav17A0A075B655 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.79■□□□□ 0.76
Trav17A0A075B655 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trav17A0A075B655 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Trav17A0A075B655 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.78■□□□□ 0.76
Trav17A0A075B655 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav17A0A075B655 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav17A0A075B655 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav17A0A075B655 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trav17A0A075B655 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Trav17A0A075B655 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.76■□□□□ 0.75
Trav17A0A075B655 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.76■□□□□ 0.75
Trav17A0A075B655 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav17A0A075B655 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trav17A0A075B655 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trav17A0A075B655 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav17A0A075B655 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.75■□□□□ 0.75
Trav17A0A075B655 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav17A0A075B655 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trav17A0A075B655 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.74■□□□□ 0.75
Trav17A0A075B655 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav17A0A075B655 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav17A0A075B655 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Trav17A0A075B655 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Trav17A0A075B655 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav17A0A075B655 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
Trav17A0A075B655 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.72■□□□□ 0.75
Trav17A0A075B655 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav17A0A075B655 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trav17A0A075B655 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav17A0A075B655 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav17A0A075B655 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav17A0A075B655 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trav17A0A075B655 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.7■□□□□ 0.74
Trav17A0A075B655 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trav17A0A075B655 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav17A0A075B655 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav17A0A075B655 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trav17A0A075B655 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.65■□□□□ 0.74
Trav17A0A075B655 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav17A0A075B655 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.65■□□□□ 0.74
Trav17A0A075B655 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav17A0A075B655 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trav17A0A075B655 Gm27322-201ENSMUST00000184007 104 ntBASIC19.64■□□□□ 0.73
Trav17A0A075B655 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Trav17A0A075B655 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trav17A0A075B655 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav17A0A075B655 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav17A0A075B655 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav17A0A075B655 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav17A0A075B655 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.63■□□□□ 0.73
Trav17A0A075B655 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav17A0A075B655 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav17A0A075B655 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trav17A0A075B655 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav17A0A075B655 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trav17A0A075B655 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav17A0A075B655 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav17A0A075B655 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav17A0A075B655 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav17A0A075B655 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
Trav17A0A075B655 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav17A0A075B655 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trav17A0A075B655 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Trav17A0A075B655 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav17A0A075B655 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav17A0A075B655 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms